Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 TMBIM7P-203ENST00000641617 1718 ntBASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 RNMTL1P1-201ENST00000454103 560 ntBASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 NDUFV2P1-201ENST00000596415 907 ntBASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 AC138696.2-201ENST00000607376 223 ntBASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 AC009093.2-202ENST00000620513 2079 ntBASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 AC126365.1-201ENST00000578585 1514 ntBASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 AC100827.2-201ENST00000563214 1194 ntBASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 AL021578.1-201ENST00000613646 709 ntBASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.94□□□□□ -0.02
TBC1D3FA6NER0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms