Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RCCD1A6NED2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.01■□□□□ 0.15
RCCD1A6NED2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 TSEN15P1-201ENST00000423257 515 ntBASIC16.01■□□□□ 0.15
RCCD1A6NED2 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.01■□□□□ 0.15
RCCD1A6NED2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 AC140878.1-201ENST00000565277 250 ntBASIC16.01■□□□□ 0.15
RCCD1A6NED2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
RCCD1A6NED2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RCCD1A6NED2 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RCCD1A6NED2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 KRT8P24-201ENST00000560290 1559 ntBASIC16■□□□□ 0.15
RCCD1A6NED2 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16■□□□□ 0.15
RCCD1A6NED2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RCCD1A6NED2 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 AC020910.6-201ENST00000623084 1459 ntBASIC16■□□□□ 0.15
RCCD1A6NED2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16■□□□□ 0.15
RCCD1A6NED2 TREML5P-201ENST00000421694 576 ntBASIC16■□□□□ 0.15
RCCD1A6NED2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16■□□□□ 0.15
RCCD1A6NED2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16■□□□□ 0.15
RCCD1A6NED2 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC16■□□□□ 0.15
RCCD1A6NED2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16■□□□□ 0.15
RCCD1A6NED2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16■□□□□ 0.15
RCCD1A6NED2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16■□□□□ 0.15
RCCD1A6NED2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16■□□□□ 0.15
RCCD1A6NED2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 DUX4L47-201ENST00000566374 394 ntBASIC16■□□□□ 0.15
RCCD1A6NED2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
RCCD1A6NED2 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16■□□□□ 0.15
RCCD1A6NED2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16■□□□□ 0.15
RCCD1A6NED2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RCCD1A6NED2 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16■□□□□ 0.15
RCCD1A6NED2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
RCCD1A6NED2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCCD1A6NED2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RCCD1A6NED2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms