Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 AC090643.2-201ENST00000623442 2029 ntBASIC13.12□□□□□ -0.31
SHISA3A0PJX4 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 AC023274.1-201ENST00000418278 595 ntBASIC13.12□□□□□ -0.31
SHISA3A0PJX4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 KRT18P3-201ENST00000451602 1288 ntBASIC13.12□□□□□ -0.31
SHISA3A0PJX4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 AC007967.4-201ENST00000614700 386 ntBASIC13.12□□□□□ -0.31
SHISA3A0PJX4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 AC072061.1-201ENST00000569710 2234 ntBASIC13.12□□□□□ -0.31
SHISA3A0PJX4 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.12□□□□□ -0.31
SHISA3A0PJX4 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 OR2I1P-209ENST00000641730 5365 ntBASIC13.11□□□□□ -0.31
SHISA3A0PJX4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 AL080243.2-201ENST00000418783 582 ntBASIC13.11□□□□□ -0.31
SHISA3A0PJX4 GPS2P2-201ENST00000430745 888 ntBASIC13.11□□□□□ -0.31
SHISA3A0PJX4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 AC000095.1-201ENST00000603208 874 ntBASIC13.11□□□□□ -0.31
SHISA3A0PJX4 MIR6069-201ENST00000620069 79 ntBASIC13.11□□□□□ -0.31
SHISA3A0PJX4 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 AC011498.7-201ENST00000624986 2027 ntBASIC13.11□□□□□ -0.31
SHISA3A0PJX4 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 HSPA8P5-201ENST00000456928 2069 ntBASIC13.11□□□□□ -0.31
SHISA3A0PJX4 IL9RP2-201ENST00000423948 1312 ntBASIC13.11□□□□□ -0.31
SHISA3A0PJX4 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SHISA3A0PJX4 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.1□□□□□ -0.31
SHISA3A0PJX4 MYADML-201ENST00000474610 2147 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms