Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 AC120045.2-201ENST00000567334 178 ntBASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 AC007431.3-201ENST00000623221 587 ntBASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 BX539320.1-201ENST00000623759 877 ntBASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 TSPY16P-201ENST00000449843 468 ntBASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 SERBP1P5-201ENST00000510079 1181 ntBASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 AC010326.4-201ENST00000604665 891 ntBASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 AC004233.3-201ENST00000607794 1269 ntBASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 AL157414.3-201ENST00000624276 1954 ntBASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA11Q9Y5H2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 CICP20-201ENST00000443330 2801 ntBASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 C1QBPP1-201ENST00000400117 770 ntBASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 MIR8072-201ENST00000614241 80 ntBASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 PRSS30P-206ENST00000641773 873 ntBASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms