Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 TREML5P-201ENST00000421694 576 ntBASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 BASP1P1-201ENST00000430708 665 ntBASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 DUX4L27-201ENST00000554796 1261 ntBASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 AL158211.3-201ENST00000607385 239 ntBASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 AC011474.4-201ENST00000623523 2076 ntBASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.38■□□□□ 0.37
R3HCC1Q9Y3T6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 MIR770-201ENST00000390219 98 ntBASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 AC004987.2-201ENST00000395959 1148 ntBASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 SERBP1P3-201ENST00000459980 809 ntBASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 AC093214.1-201ENST00000511688 1107 ntBASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 RNA5SP421-201ENST00000516864 134 ntBASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 FO538757.1-201ENST00000623083 1397 ntBASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms