Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AQP7P5-201ENST00000428759 1049 ntBASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 XBP1P1-201ENST00000436573 652 ntBASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AL645933.1-201ENST00000440087 609 ntBASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AQP7P4-201ENST00000447083 1042 ntBASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AL135901.1-201ENST00000451812 333 ntBASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AQP7P2-201ENST00000453967 1041 ntBASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AQP7P3-201ENST00000624547 1041 ntBASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 HYMAI-201ENST00000635591 3347 ntBASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AC092384.3-202ENST00000564646 2873 ntBASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 STK16-203ENST00000409516 895 ntTSL 2 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AC055811.3-201ENST00000584952 686 ntBASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 PEBP1P2-201ENST00000603980 558 ntBASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 AC005041.3-201ENST00000606287 649 ntBASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 MME-218ENST00000625667 363 ntTSL 5 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ZC3H4Q9UPT8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 MRPL37P1-201ENST00000592451 1337 ntBASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms