Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CICP23-201ENST00000605013 2741 ntBASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 ACTG1P2-201ENST00000415776 1125 ntBASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 ACTG1P11-201ENST00000425411 1125 ntBASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 AC003686.1-201ENST00000550956 1034 ntBASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 KRT8P19-201ENST00000551916 1455 ntBASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 AC091951.1-201ENST00000512854 2465 ntBASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 AC239868.1-201ENST00000369385 493 ntBASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 KRT18P36-201ENST00000411618 1276 ntBASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 ISCA2P1-201ENST00000425548 448 ntBASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 RN7SL720P-201ENST00000488178 304 ntBASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 AC245884.6-201ENST00000515672 1067 ntBASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 AC105129.2-201ENST00000559536 390 ntBASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms