Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 HLA-H-201ENST00000383620 1096 ntBASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 AC004890.2-204ENST00000481968 304 ntBASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 ALG1L8P-201ENST00000533887 760 ntBASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 AC067750.1-201ENST00000608826 6545 ntBASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCM2LQ9NUG4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.4□□□□□ -0.11
CCM2LQ9NUG4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CCM2LQ9NUG4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
CCM2LQ9NUG4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms