Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 GPR53P-205ENST00000457298 1084 ntBASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 OR10B1P-201ENST00000601666 907 ntBASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 LINC00552-201ENST00000625151 2579 ntBASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 RN7SKP175-201ENST00000408472 289 ntBASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 AC239800.4-201ENST00000603712 296 ntBASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 MIR6775-201ENST00000617557 69 ntBASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.27■□□□□ 0.52
ECHDC1Q9NTX5 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
ECHDC1Q9NTX5 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ECHDC1Q9NTX5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
ECHDC1Q9NTX5 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.27■□□□□ 0.51
ECHDC1Q9NTX5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ECHDC1Q9NTX5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.27■□□□□ 0.51
ECHDC1Q9NTX5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ECHDC1Q9NTX5 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ECHDC1Q9NTX5 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ECHDC1Q9NTX5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
ECHDC1Q9NTX5 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.27■□□□□ 0.51
ECHDC1Q9NTX5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
ECHDC1Q9NTX5 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 MIR1202-201ENST00000408529 83 ntBASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 AC104989.1-201ENST00000519711 778 ntBASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ECHDC1Q9NTX5 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms