Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 RN7SL560P-201ENST00000577943 264 ntBASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 MIR6799-201ENST00000620297 69 ntBASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 ACE3P-201ENST00000423435 1973 ntBASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 AC020910.5-201ENST00000623668 1865 ntBASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 AC023090.2-201ENST00000625182 2110 ntBASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 ZBED1P1-201ENST00000502364 1930 ntBASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 TCAF2P1-201ENST00000291129 2421 ntBASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAT1LQ9HCJ6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 MESTP3-201ENST00000503460 968 ntBASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 FTLP10-202ENST00000505798 471 ntBASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 AP003171.2-201ENST00000528208 925 ntBASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 DUX4L45-201ENST00000566406 1057 ntBASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 MIR4538-201ENST00000581377 78 ntBASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 RN7SL219P-201ENST00000582872 296 ntBASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 KRT8P4-201ENST00000509735 1454 ntBASIC17.44■□□□□ 0.38
VAT1LQ9HCJ6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 FAM86MP-201ENST00000340703 885 ntBASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 MIR1908-201ENST00000410394 80 ntBASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 HOMER2P2-201ENST00000451621 847 ntBASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.43■□□□□ 0.38
VAT1LQ9HCJ6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms