Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BRF2Q9HAW0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 AP001267.2-201ENST00000532619 2086 ntBASIC14.4□□□□□ -0.1
BRF2Q9HAW0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 AL365209.1-201ENST00000624418 6473 ntBASIC14.4□□□□□ -0.1
BRF2Q9HAW0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 AC007969.1-201ENST00000433675 447 ntBASIC14.4□□□□□ -0.1
BRF2Q9HAW0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.4□□□□□ -0.1
BRF2Q9HAW0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 AL161772.1-201ENST00000610494 4412 ntBASIC14.4□□□□□ -0.1
BRF2Q9HAW0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BRF2Q9HAW0 KRT8P35-201ENST00000483942 1338 ntBASIC14.4□□□□□ -0.1
BRF2Q9HAW0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
BRF2Q9HAW0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 AGGF1P1-201ENST00000509500 2073 ntBASIC14.39□□□□□ -0.11
BRF2Q9HAW0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 AC236430.1-201ENST00000402231 743 ntBASIC14.39□□□□□ -0.11
BRF2Q9HAW0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.39□□□□□ -0.11
BRF2Q9HAW0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 AC022447.6-201ENST00000515522 438 ntBASIC14.39□□□□□ -0.11
BRF2Q9HAW0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 AC092364.2-202ENST00000597012 1073 ntBASIC14.39□□□□□ -0.11
BRF2Q9HAW0 WFDC1-204ENST00000613603 549 ntBASIC14.39□□□□□ -0.11
BRF2Q9HAW0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms