Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP28Q9H239 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
MMP28Q9H239 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
MMP28Q9H239 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
MMP28Q9H239 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
MMP28Q9H239 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.4□□□□□ -0.26
MMP28Q9H239 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
MMP28Q9H239 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.4□□□□□ -0.26
MMP28Q9H239 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
MMP28Q9H239 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
MMP28Q9H239 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
MMP28Q9H239 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.4□□□□□ -0.26
MMP28Q9H239 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.4□□□□□ -0.26
MMP28Q9H239 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.4□□□□□ -0.26
MMP28Q9H239 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.4□□□□□ -0.26
MMP28Q9H239 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
MMP28Q9H239 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.4□□□□□ -0.26
MMP28Q9H239 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
MMP28Q9H239 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.4□□□□□ -0.26
MMP28Q9H239 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.4□□□□□ -0.26
MMP28Q9H239 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
MMP28Q9H239 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 AL135744.1-201ENST00000565098 629 ntBASIC13.4□□□□□ -0.26
MMP28Q9H239 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
MMP28Q9H239 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.4□□□□□ -0.26
MMP28Q9H239 AL365330.1-201ENST00000607459 531 ntBASIC13.4□□□□□ -0.26
MMP28Q9H239 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.4□□□□□ -0.26
MMP28Q9H239 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
MMP28Q9H239 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
MMP28Q9H239 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
MMP28Q9H239 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.4□□□□□ -0.26
MMP28Q9H239 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.4□□□□□ -0.26
MMP28Q9H239 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.4□□□□□ -0.26
MMP28Q9H239 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP28Q9H239 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
MMP28Q9H239 CICP16-201ENST00000502609 2813 ntBASIC13.4□□□□□ -0.27
MMP28Q9H239 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.4□□□□□ -0.27
MMP28Q9H239 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.39□□□□□ -0.27
MMP28Q9H239 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MMP28Q9H239 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MMP28Q9H239 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
MMP28Q9H239 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
MMP28Q9H239 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MMP28Q9H239 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MMP28Q9H239 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MMP28Q9H239 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MMP28Q9H239 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.39□□□□□ -0.27
MMP28Q9H239 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
MMP28Q9H239 DMBT1P1-203ENST00000636837 4628 ntBASIC13.39□□□□□ -0.27
MMP28Q9H239 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.39□□□□□ -0.27
MMP28Q9H239 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
MMP28Q9H239 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MMP28Q9H239 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
MMP28Q9H239 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
MMP28Q9H239 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.39□□□□□ -0.27
MMP28Q9H239 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MMP28Q9H239 TFAMP1-201ENST00000412727 736 ntBASIC13.39□□□□□ -0.27
MMP28Q9H239 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MMP28Q9H239 AC254562.1-201ENST00000417586 456 ntBASIC13.39□□□□□ -0.27
MMP28Q9H239 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
MMP28Q9H239 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
MMP28Q9H239 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
MMP28Q9H239 AC093724.1-201ENST00000448659 1027 ntBASIC13.39□□□□□ -0.27
MMP28Q9H239 CEND1P1-201ENST00000451006 455 ntBASIC13.39□□□□□ -0.27
MMP28Q9H239 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.39□□□□□ -0.27
MMP28Q9H239 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.39□□□□□ -0.27
MMP28Q9H239 PRYP6-201ENST00000514804 343 ntBASIC13.39□□□□□ -0.27
MMP28Q9H239 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
MMP28Q9H239 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
MMP28Q9H239 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
MMP28Q9H239 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
MMP28Q9H239 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.39□□□□□ -0.27
MMP28Q9H239 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.39□□□□□ -0.27
MMP28Q9H239 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.39□□□□□ -0.27
MMP28Q9H239 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
MMP28Q9H239 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.39□□□□□ -0.27
MMP28Q9H239 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
MMP28Q9H239 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.39□□□□□ -0.27
MMP28Q9H239 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms