Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC18.83■□□□□ 0.61
SHANK3Q9BYB0 KRT8P2-201ENST00000556193 944 ntBASIC18.83■□□□□ 0.61
SHANK3Q9BYB0 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SHANK3Q9BYB0 USB1-205ENST00000561743 1135 ntTSL 3 BASIC18.83■□□□□ 0.61
SHANK3Q9BYB0 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC18.83■□□□□ 0.61
SHANK3Q9BYB0 THY1-209ENST00000580275 578 ntTSL 3 BASIC18.83■□□□□ 0.61
SHANK3Q9BYB0 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
SHANK3Q9BYB0 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC18.83■□□□□ 0.61
SHANK3Q9BYB0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHANK3Q9BYB0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHANK3Q9BYB0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.83■□□□□ 0.61
SHANK3Q9BYB0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 AL357373.1-201ENST00000394974 322 ntBASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 FAM86KP-201ENST00000509817 987 ntBASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 NT5C-204ENST00000578337 582 ntTSL 2 BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHANK3Q9BYB0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 HCG27-204ENST00000424675 895 ntTSL 3 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 HELLS-212ENST00000630929 400 ntTSL 5 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 AC006372.4-201ENST00000624122 1543 ntBASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SHANK3Q9BYB0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 RPL3P2-204ENST00000413027 1203 ntBASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 AC004522.1-201ENST00000419978 654 ntBASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 GCSHP3-201ENST00000431120 391 ntBASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 AL591471.1-201ENST00000621855 229 ntBASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK3Q9BYB0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC18.8■□□□□ 0.6
SHANK3Q9BYB0 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHANK3Q9BYB0 UROS-201ENST00000368774 744 ntTSL 2 BASIC18.8■□□□□ 0.6
SHANK3Q9BYB0 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SHANK3Q9BYB0 KRT17P4-201ENST00000429445 819 ntBASIC18.8■□□□□ 0.6
SHANK3Q9BYB0 KRT18P46-201ENST00000435568 1279 ntBASIC18.8■□□□□ 0.6
SHANK3Q9BYB0 OR5BD1P-201ENST00000532527 817 ntBASIC18.8■□□□□ 0.6
SHANK3Q9BYB0 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
SHANK3Q9BYB0 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC18.8■□□□□ 0.6
SHANK3Q9BYB0 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.8■□□□□ 0.6
SHANK3Q9BYB0 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SHANK3Q9BYB0 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms