Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 BEND3P3-201ENST00000611030 2440 ntBASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SEC22CQ9BRL7 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 AOC4P-203ENST00000566825 2289 ntBASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 AZGP1P1-201ENST00000411909 902 ntBASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 MEX3B-202ENST00000558133 4333 ntBASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC22CQ9BRL7 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 AC004945.1-201ENST00000416738 983 ntBASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 PCED1CP-201ENST00000419887 785 ntBASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 AC005593.1-201ENST00000624894 515 ntBASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC22CQ9BRL7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms