Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLF1Q9BQI6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.49■□□□□ 0.39
SLF1Q9BQI6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 AL136309.1-201ENST00000403917 691 ntBASIC17.49■□□□□ 0.39
SLF1Q9BQI6 CHMP1AP1-201ENST00000445563 662 ntBASIC17.49■□□□□ 0.39
SLF1Q9BQI6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 AC012508.2-201ENST00000567613 1472 ntBASIC17.49■□□□□ 0.39
SLF1Q9BQI6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF1Q9BQI6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 CALR4P-201ENST00000431943 946 ntBASIC17.48■□□□□ 0.39
SLF1Q9BQI6 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.48■□□□□ 0.39
SLF1Q9BQI6 AP001002.3-201ENST00000623482 206 ntBASIC17.48■□□□□ 0.39
SLF1Q9BQI6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 AC087481.3-201ENST00000602886 1894 ntBASIC17.48■□□□□ 0.39
SLF1Q9BQI6 AL137783.1-201ENST00000623494 1896 ntBASIC17.48■□□□□ 0.39
SLF1Q9BQI6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF1Q9BQI6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF1Q9BQI6 FKBP4P6-201ENST00000457486 1332 ntBASIC17.47■□□□□ 0.39
SLF1Q9BQI6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms