Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 LILRP1-201ENST00000444199 1370 ntBASIC15.2■□□□□ 0.02
NDNQ99608 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NDNQ99608 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 OR2I1P-209ENST00000641730 5365 ntBASIC15.2■□□□□ 0.02
NDNQ99608 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NDNQ99608 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.19■□□□□ 0.02
NDNQ99608 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NDNQ99608 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.19■□□□□ 0.02
NDNQ99608 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NDNQ99608 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.19■□□□□ 0.02
NDNQ99608 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.19■□□□□ 0.02
NDNQ99608 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 SPDYE19P-201ENST00000338590 713 ntBASIC15.19■□□□□ 0.02
NDNQ99608 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.19■□□□□ 0.02
NDNQ99608 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.19■□□□□ 0.02
NDNQ99608 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.19■□□□□ 0.02
NDNQ99608 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.19■□□□□ 0.02
NDNQ99608 AC004066.1-201ENST00000502488 802 ntBASIC15.19■□□□□ 0.02
NDNQ99608 GAPDHP40-201ENST00000505218 1006 ntBASIC15.19■□□□□ 0.02
NDNQ99608 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.19■□□□□ 0.02
NDNQ99608 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 RARRES2P5-201ENST00000564013 466 ntBASIC15.19■□□□□ 0.02
NDNQ99608 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.19■□□□□ 0.02
NDNQ99608 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NDNQ99608 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.19■□□□□ 0.02
NDNQ99608 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.19■□□□□ 0.02
NDNQ99608 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
NDNQ99608 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.19■□□□□ 0.02
NDNQ99608 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.19■□□□□ 0.02
NDNQ99608 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.19■□□□□ 0.02
NDNQ99608 AC007787.1-201ENST00000588095 1583 ntBASIC15.19■□□□□ 0.02
NDNQ99608 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.19■□□□□ 0.02
NDNQ99608 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NDNQ99608 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.19■□□□□ 0.02
NDNQ99608 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDNQ99608 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.19■□□□□ 0.02
NDNQ99608 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NDNQ99608 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 AL360270.3-201ENST00000609118 1348 ntBASIC15.18■□□□□ 0.02
NDNQ99608 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.18■□□□□ 0.02
NDNQ99608 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.18■□□□□ 0.02
NDNQ99608 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.18■□□□□ 0.02
NDNQ99608 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 AC099521.3-201ENST00000624251 2938 ntBASIC15.18■□□□□ 0.02
NDNQ99608 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.18■□□□□ 0.02
NDNQ99608 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NDNQ99608 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.18■□□□□ 0.02
NDNQ99608 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.18■□□□□ 0.02
NDNQ99608 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.18■□□□□ 0.02
NDNQ99608 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.18■□□□□ 0.02
NDNQ99608 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.18■□□□□ 0.02
NDNQ99608 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.18■□□□□ 0.02
NDNQ99608 AL049840.4-201ENST00000602422 811 ntBASIC15.18■□□□□ 0.02
NDNQ99608 AC107373.2-201ENST00000607735 490 ntBASIC15.18■□□□□ 0.02
NDNQ99608 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NDNQ99608 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
NDNQ99608 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
NDNQ99608 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
NDNQ99608 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.18■□□□□ 0.02
NDNQ99608 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NDNQ99608 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.18■□□□□ 0.02
NDNQ99608 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NDNQ99608 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms