Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 AC023157.3-201ENST00000619086 2088 ntBASIC17.62■□□□□ 0.41
TRIM47Q96LD4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 FAM8A4P-201ENST00000435433 1213 ntBASIC17.62■□□□□ 0.41
TRIM47Q96LD4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 AC008267.1-201ENST00000474858 1069 ntBASIC17.62■□□□□ 0.41
TRIM47Q96LD4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 AC022217.1-201ENST00000521069 738 ntBASIC17.62■□□□□ 0.41
TRIM47Q96LD4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 AC008132.1-202ENST00000342005 1389 ntBASIC17.62■□□□□ 0.41
TRIM47Q96LD4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 AC091544.8-201ENST00000619490 361 ntBASIC17.61■□□□□ 0.41
TRIM47Q96LD4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 AC138035.3-201ENST00000622706 2791 ntBASIC17.61■□□□□ 0.41
TRIM47Q96LD4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM47Q96LD4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 AL109954.1-202ENST00000564051 2148 ntBASIC17.6■□□□□ 0.41
TRIM47Q96LD4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 AC009090.5-201ENST00000624886 2285 ntBASIC17.6■□□□□ 0.41
TRIM47Q96LD4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM47Q96LD4 AC069218.1-201ENST00000435269 762 ntBASIC17.6■□□□□ 0.41
TRIM47Q96LD4 NUP210P1-202ENST00000504322 710 ntBASIC17.6■□□□□ 0.41
TRIM47Q96LD4 AC024681.1-201ENST00000521917 487 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms