Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 AC087481.3-201ENST00000602886 1894 ntBASIC17.94■□□□□ 0.46
SNED1Q8TER0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.93■□□□□ 0.46
SNED1Q8TER0 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 TMBIM7P-203ENST00000641617 1718 ntBASIC17.93■□□□□ 0.46
SNED1Q8TER0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNED1Q8TER0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SNED1Q8TER0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 AC007952.4-201ENST00000573866 637 ntBASIC17.92■□□□□ 0.46
SNED1Q8TER0 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 AC138466.5-201ENST00000624002 808 ntBASIC17.92■□□□□ 0.46
SNED1Q8TER0 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 MROH4P-201ENST00000431302 1578 ntBASIC17.92■□□□□ 0.46
SNED1Q8TER0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
SNED1Q8TER0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNED1Q8TER0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNED1Q8TER0 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNED1Q8TER0 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 AL512306.1-201ENST00000432698 848 ntBASIC17.91■□□□□ 0.46
SNED1Q8TER0 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNED1Q8TER0 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 AC244250.3-201ENST00000620749 366 ntBASIC17.91■□□□□ 0.46
SNED1Q8TER0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNED1Q8TER0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNED1Q8TER0 AC023024.2-201ENST00000623561 1993 ntBASIC17.91■□□□□ 0.46
SNED1Q8TER0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNED1Q8TER0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 PPT1-215ENST00000641471 2368 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms