Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 MIR770-201ENST00000390219 98 ntBASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 NUS1P3-201ENST00000423502 862 ntBASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 BRI3BPP1-201ENST00000594224 787 ntBASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 AL662799.1-202ENST00000614205 422 ntBASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 AC007431.3-201ENST00000623221 587 ntBASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 BX539320.1-201ENST00000623759 877 ntBASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAF3IP1Q8TDR0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAF3IP1Q8TDR0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAF3IP1Q8TDR0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAF3IP1Q8TDR0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAF3IP1Q8TDR0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAF3IP1Q8TDR0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAF3IP1Q8TDR0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAF3IP1Q8TDR0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TRAF3IP1Q8TDR0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
TRAF3IP1Q8TDR0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAF3IP1Q8TDR0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAF3IP1Q8TDR0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 AC126335.2-201ENST00000623362 4637 ntBASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 C1QBPP1-201ENST00000400117 770 ntBASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 AC004233.3-201ENST00000607794 1269 ntBASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 AC093726.1-201ENST00000608064 963 ntBASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 AC099568.2-201ENST00000609194 695 ntBASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP1Q8TDR0 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 AC018442.1-201ENST00000421439 2061 ntBASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms