Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC22.55■■□□□ 1.2
CCER1Q8TC90 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC22.55■■□□□ 1.2
CCER1Q8TC90 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC22.55■■□□□ 1.2
CCER1Q8TC90 AL158211.3-201ENST00000607385 239 ntBASIC22.55■■□□□ 1.2
CCER1Q8TC90 AL391069.4-201ENST00000609583 481 ntBASIC22.55■■□□□ 1.2
CCER1Q8TC90 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CCER1Q8TC90 AL158070.2-201ENST00000623713 1621 ntBASIC22.55■■□□□ 1.2
CCER1Q8TC90 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCER1Q8TC90 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CCER1Q8TC90 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCER1Q8TC90 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CCER1Q8TC90 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC22.55■■□□□ 1.2
CCER1Q8TC90 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCER1Q8TC90 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 AL354702.1-201ENST00000442006 1960 ntBASIC22.54■■□□□ 1.2
CCER1Q8TC90 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 KRT18P13-201ENST00000400056 1290 ntBASIC22.54■■□□□ 1.2
CCER1Q8TC90 TSSK5P-201ENST00000423978 907 ntBASIC22.54■■□□□ 1.2
CCER1Q8TC90 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 AC009407.1-201ENST00000568958 598 ntBASIC22.54■■□□□ 1.2
CCER1Q8TC90 AC015911.4-201ENST00000588022 1070 ntBASIC22.54■■□□□ 1.2
CCER1Q8TC90 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 AC010327.5-201ENST00000586923 3061 ntBASIC22.54■■□□□ 1.2
CCER1Q8TC90 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCER1Q8TC90 API5-203ENST00000455725 2257 ntTSL 2 BASIC22.54■■□□□ 1.2
CCER1Q8TC90 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC22.53■■□□□ 1.2
CCER1Q8TC90 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC22.53■■□□□ 1.2
CCER1Q8TC90 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC22.53■■□□□ 1.2
CCER1Q8TC90 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CCER1Q8TC90 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC22.53■■□□□ 1.2
CCER1Q8TC90 LSM12-202ENST00000585388 942 ntTSL 3 BASIC22.53■■□□□ 1.2
CCER1Q8TC90 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
CCER1Q8TC90 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 AC093525.8-201ENST00000624099 1342 ntBASIC22.53■■□□□ 1.2
CCER1Q8TC90 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCER1Q8TC90 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC22.52■■□□□ 1.2
CCER1Q8TC90 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCER1Q8TC90 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC22.52■■□□□ 1.2
CCER1Q8TC90 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCER1Q8TC90 R3HDM2P2-201ENST00000401880 2116 ntBASIC22.52■■□□□ 1.2
CCER1Q8TC90 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC22.52■■□□□ 1.2
CCER1Q8TC90 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CCER1Q8TC90 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCER1Q8TC90 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CCER1Q8TC90 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC22.52■■□□□ 1.2
CCER1Q8TC90 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCER1Q8TC90 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
CCER1Q8TC90 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCER1Q8TC90 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCER1Q8TC90 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
CCER1Q8TC90 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCER1Q8TC90 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC22.52■■□□□ 1.2
CCER1Q8TC90 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC22.52■■□□□ 1.2
CCER1Q8TC90 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCER1Q8TC90 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CCER1Q8TC90 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC22.52■■□□□ 1.2
CCER1Q8TC90 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCER1Q8TC90 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCER1Q8TC90 MIR943-201ENST00000401286 94 ntBASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms