Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 AC023908.3-201ENST00000564211 3047 ntBASIC14.14□□□□□ -0.15
NUP43Q8NFH3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
NUP43Q8NFH3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 AC015656.1-201ENST00000624209 3578 ntBASIC14.13□□□□□ -0.15
NUP43Q8NFH3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 WASH4P-201ENST00000564273 1246 ntBASIC14.13□□□□□ -0.15
NUP43Q8NFH3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 LRRC59-203ENST00000576448 1531 ntBASIC14.13□□□□□ -0.15
NUP43Q8NFH3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 AC005912.2-201ENST00000619492 2400 ntBASIC14.13□□□□□ -0.15
NUP43Q8NFH3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP43Q8NFH3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 AC055811.4-201ENST00000624039 1754 ntBASIC14.12□□□□□ -0.15
NUP43Q8NFH3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 AC113367.3-201ENST00000508316 1912 ntBASIC14.12□□□□□ -0.15
NUP43Q8NFH3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 AP001063.1-201ENST00000568332 529 ntBASIC14.12□□□□□ -0.15
NUP43Q8NFH3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 TP53TG3HP-202ENST00000569755 579 ntBASIC14.12□□□□□ -0.15
NUP43Q8NFH3 CLUHP6-201ENST00000580789 941 ntBASIC14.12□□□□□ -0.15
NUP43Q8NFH3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP43Q8NFH3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
NUP43Q8NFH3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NUP43Q8NFH3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.11□□□□□ -0.15
NUP43Q8NFH3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NUP43Q8NFH3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NUP43Q8NFH3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.11□□□□□ -0.15
NUP43Q8NFH3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NUP43Q8NFH3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NUP43Q8NFH3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms