Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
C3orf56Q8N813 AC092053.3-201ENST00000641308 4975 ntBASIC11.84□□□□□ -0.51
C3orf56Q8N813 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
C3orf56Q8N813 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
C3orf56Q8N813 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 AL627231.1-201ENST00000394467 1125 ntBASIC11.84□□□□□ -0.51
C3orf56Q8N813 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 RPL13AP19-201ENST00000434320 584 ntBASIC11.84□□□□□ -0.51
C3orf56Q8N813 AL157792.1-201ENST00000488281 530 ntBASIC11.84□□□□□ -0.51
C3orf56Q8N813 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 AC116345.2-201ENST00000512837 523 ntBASIC11.84□□□□□ -0.51
C3orf56Q8N813 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 AC092171.5-201ENST00000608012 942 ntBASIC11.84□□□□□ -0.51
C3orf56Q8N813 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
C3orf56Q8N813 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
C3orf56Q8N813 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
C3orf56Q8N813 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 KRT8P14-201ENST00000414254 1442 ntBASIC11.84□□□□□ -0.51
C3orf56Q8N813 AC005915.1-201ENST00000624912 2018 ntBASIC11.84□□□□□ -0.51
C3orf56Q8N813 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
C3orf56Q8N813 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
C3orf56Q8N813 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
C3orf56Q8N813 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
C3orf56Q8N813 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
C3orf56Q8N813 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
C3orf56Q8N813 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC11.83□□□□□ -0.51
C3orf56Q8N813 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
C3orf56Q8N813 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC11.83□□□□□ -0.51
C3orf56Q8N813 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
C3orf56Q8N813 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 ISCA2P1-201ENST00000425548 448 ntBASIC11.83□□□□□ -0.52
C3orf56Q8N813 PUDPP3-201ENST00000445368 636 ntBASIC11.83□□□□□ -0.52
C3orf56Q8N813 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 WT1-AS_6.1-201ENST00000614919 121 ntBASIC11.83□□□□□ -0.52
C3orf56Q8N813 AL136301.1-201ENST00000615830 422 ntBASIC11.83□□□□□ -0.52
C3orf56Q8N813 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms