Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 FGD5P1-202ENST00000614866 2498 ntBASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 AC004945.1-201ENST00000416738 983 ntBASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 FAM21FP-201ENST00000426241 1131 ntBASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 HOMER2P2-201ENST00000451621 847 ntBASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 BNIP3P42-201ENST00000454982 569 ntBASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 RNA5SP412-201ENST00000516234 123 ntBASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 BNIP3P29-201ENST00000598302 571 ntBASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 AC073413.1-201ENST00000603927 732 ntBASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 ZACNP1-201ENST00000612259 710 ntBASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 AC011447.5-201ENST00000616168 564 ntBASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 INE2-201ENST00000630399 1874 ntBASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 AL136309.1-201ENST00000403917 691 ntBASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 AC131206.1-201ENST00000538078 1211 ntBASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 AC020910.5-201ENST00000623668 1865 ntBASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 TNRC18P2-201ENST00000417666 2714 ntBASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAM1L1Q8N609 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.83□□□□□ -0.03
TRAM1L1Q8N609 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.83□□□□□ -0.03
TRAM1L1Q8N609 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.83□□□□□ -0.03
TRAM1L1Q8N609 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAM1L1Q8N609 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAM1L1Q8N609 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAM1L1Q8N609 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAM1L1Q8N609 CICP23-201ENST00000605013 2741 ntBASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAM1L1Q8N609 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms