Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.46■□□□□ 0.07
SIX5Q8N196 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.46■□□□□ 0.07
SIX5Q8N196 AC005324.6-201ENST00000587972 613 ntBASIC15.46■□□□□ 0.07
SIX5Q8N196 AC087045.2-201ENST00000606279 1003 ntBASIC15.46■□□□□ 0.07
SIX5Q8N196 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
SIX5Q8N196 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.46■□□□□ 0.07
SIX5Q8N196 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SIX5Q8N196 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SIX5Q8N196 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SIX5Q8N196 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
SIX5Q8N196 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
SIX5Q8N196 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.45■□□□□ 0.06
SIX5Q8N196 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.45■□□□□ 0.06
SIX5Q8N196 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
SIX5Q8N196 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
SIX5Q8N196 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
SIX5Q8N196 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 NORAD-201ENST00000565493 5339 ntBASIC15.45■□□□□ 0.06
SIX5Q8N196 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
SIX5Q8N196 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SIX5Q8N196 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 AC078991.1-201ENST00000437297 610 ntBASIC15.45■□□□□ 0.06
SIX5Q8N196 AL160314.3-201ENST00000556041 767 ntBASIC15.45■□□□□ 0.06
SIX5Q8N196 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.45■□□□□ 0.06
SIX5Q8N196 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.45■□□□□ 0.06
SIX5Q8N196 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.45■□□□□ 0.06
SIX5Q8N196 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 AC092171.5-201ENST00000608012 942 ntBASIC15.45■□□□□ 0.06
SIX5Q8N196 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SIX5Q8N196 AL603764.1-201ENST00000636452 321 ntBASIC15.45■□□□□ 0.06
SIX5Q8N196 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 CICP14-201ENST00000629111 2732 ntBASIC15.45■□□□□ 0.06
SIX5Q8N196 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.45■□□□□ 0.06
SIX5Q8N196 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.45■□□□□ 0.06
SIX5Q8N196 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SIX5Q8N196 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SIX5Q8N196 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIX5Q8N196 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.44■□□□□ 0.06
SIX5Q8N196 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 TBC1D3J-201ENST00000620719 1426 ntBASIC15.44■□□□□ 0.06
SIX5Q8N196 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.44■□□□□ 0.06
SIX5Q8N196 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.44■□□□□ 0.06
SIX5Q8N196 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
SIX5Q8N196 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.44■□□□□ 0.06
SIX5Q8N196 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.44■□□□□ 0.06
SIX5Q8N196 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.44■□□□□ 0.06
SIX5Q8N196 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 RPL18P13-201ENST00000478088 569 ntBASIC15.44■□□□□ 0.06
SIX5Q8N196 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.44■□□□□ 0.06
SIX5Q8N196 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.44■□□□□ 0.06
SIX5Q8N196 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.44■□□□□ 0.06
SIX5Q8N196 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
SIX5Q8N196 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.44■□□□□ 0.06
SIX5Q8N196 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
SIX5Q8N196 AC132192.2-201ENST00000596206 1147 ntBASIC15.44■□□□□ 0.06
SIX5Q8N196 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.44■□□□□ 0.06
SIX5Q8N196 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.44■□□□□ 0.06
SIX5Q8N196 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.44■□□□□ 0.06
SIX5Q8N196 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.44■□□□□ 0.06
SIX5Q8N196 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SIX5Q8N196 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.44■□□□□ 0.06
SIX5Q8N196 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms