Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 DUX4L47-201ENST00000566374 394 ntBASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 AC004233.3-201ENST00000607794 1269 ntBASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 AJ011932.1-201ENST00000621707 465 ntBASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 AL603764.1-201ENST00000636452 321 ntBASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDKL3Q8IVW4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 KLF2P2-201ENST00000416807 1039 ntBASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 TPT1P11-201ENST00000458482 498 ntBASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 TMEM261P1-201ENST00000604899 340 ntBASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 AC007541.1-201ENST00000570282 1469 ntBASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.5■□□□□ 0.07
CDKL3Q8IVW4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 AC015656.1-201ENST00000624209 3578 ntBASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 AC133539.2-201ENST00000604757 467 ntBASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKL3Q8IVW4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms