Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 AC010141.1-201ENST00000411585 623 ntBASIC16.24■□□□□ 0.19
HERC6Q8IVU3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 AL627231.1-201ENST00000394467 1125 ntBASIC16.23■□□□□ 0.19
HERC6Q8IVU3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 RPL13AP19-201ENST00000434320 584 ntBASIC16.23■□□□□ 0.19
HERC6Q8IVU3 VDAC1P1-201ENST00000439229 848 ntBASIC16.23■□□□□ 0.19
HERC6Q8IVU3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 HLA-J-204ENST00000495278 958 ntBASIC16.23■□□□□ 0.19
HERC6Q8IVU3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 AC008805.1-201ENST00000590892 364 ntBASIC16.23■□□□□ 0.19
HERC6Q8IVU3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.23■□□□□ 0.19
HERC6Q8IVU3 AC051619.9-201ENST00000623237 597 ntBASIC16.23■□□□□ 0.19
HERC6Q8IVU3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC6Q8IVU3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 POU5F1P2-201ENST00000521750 823 ntBASIC16.22■□□□□ 0.19
HERC6Q8IVU3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms