Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 AC009145.4-201ENST00000625119 1294 ntBASIC18.49■□□□□ 0.55
COL23A1Q86Y22 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 AC025183.3-201ENST00000623526 1482 ntBASIC18.49■□□□□ 0.55
COL23A1Q86Y22 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 AC105250.1-201ENST00000509378 2057 ntBASIC18.49■□□□□ 0.55
COL23A1Q86Y22 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 LINC02199-201ENST00000506655 2702 ntBASIC18.49■□□□□ 0.55
COL23A1Q86Y22 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.48■□□□□ 0.55
COL23A1Q86Y22 AP005212.2-201ENST00000584979 510 ntBASIC18.48■□□□□ 0.55
COL23A1Q86Y22 AL627230.2-201ENST00000613254 655 ntBASIC18.48■□□□□ 0.55
COL23A1Q86Y22 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.48■□□□□ 0.55
COL23A1Q86Y22 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL23A1Q86Y22 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 AC108734.2-201ENST00000420887 1069 ntBASIC18.47■□□□□ 0.55
COL23A1Q86Y22 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 AC226150.1-201ENST00000544259 466 ntBASIC18.47■□□□□ 0.55
COL23A1Q86Y22 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 KRT8P1-201ENST00000557533 1207 ntBASIC18.47■□□□□ 0.55
COL23A1Q86Y22 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 AL513523.2-202ENST00000427283 2040 ntBASIC18.47■□□□□ 0.55
COL23A1Q86Y22 PCDHA14-201ENST00000506751 2298 ntBASIC18.47■□□□□ 0.55
COL23A1Q86Y22 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
COL23A1Q86Y22 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 AL118508.1-201ENST00000613502 2345 ntBASIC18.46■□□□□ 0.55
COL23A1Q86Y22 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms