Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 MIR600HG-201ENST00000449175 5984 ntBASIC15.31■□□□□ 0.04
PACS2Q86VP3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 CICP1-201ENST00000416803 2410 ntBASIC15.31■□□□□ 0.04
PACS2Q86VP3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 HAUS4P1-201ENST00000406739 1145 ntBASIC15.31■□□□□ 0.04
PACS2Q86VP3 PMS2P4-201ENST00000412466 1052 ntBASIC15.31■□□□□ 0.04
PACS2Q86VP3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 RSL24D1P2-201ENST00000445584 366 ntBASIC15.31■□□□□ 0.04
PACS2Q86VP3 AC004967.1-201ENST00000453589 447 ntBASIC15.31■□□□□ 0.04
PACS2Q86VP3 YBX1P5-201ENST00000509441 847 ntBASIC15.31■□□□□ 0.04
PACS2Q86VP3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 AL365181.3-201ENST00000605886 3222 ntBASIC15.3■□□□□ 0.04
PACS2Q86VP3 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 FAM86C2P-203ENST00000528684 1004 ntBASIC15.3■□□□□ 0.04
PACS2Q86VP3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 MIR4492-201ENST00000581627 80 ntBASIC15.3■□□□□ 0.04
PACS2Q86VP3 AC022148.2-201ENST00000586176 560 ntBASIC15.3■□□□□ 0.04
PACS2Q86VP3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 AC055717.3-201ENST00000622967 595 ntBASIC15.3■□□□□ 0.04
PACS2Q86VP3 AC134684.3-201ENST00000641758 218 ntBASIC15.3■□□□□ 0.04
PACS2Q86VP3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PACS2Q86VP3 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC15.3■□□□□ 0.04
PACS2Q86VP3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms