Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 AC090505.1-201ENST00000430515 1834 ntBASIC12.59□□□□□ -0.39
ZNF546Q86UE3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 CES1P1-201ENST00000421606 1704 ntBASIC12.59□□□□□ -0.39
ZNF546Q86UE3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.58□□□□□ -0.39
ZNF546Q86UE3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.58□□□□□ -0.39
ZNF546Q86UE3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ZNF546Q86UE3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ZNF546Q86UE3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
ZNF546Q86UE3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 MIR193BHG-211ENST00000641433 5365 ntBASIC12.58□□□□□ -0.4
ZNF546Q86UE3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 RPS2P28-201ENST00000314255 741 ntBASIC12.58□□□□□ -0.4
ZNF546Q86UE3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 PRSS29P-201ENST00000440800 595 ntBASIC12.58□□□□□ -0.4
ZNF546Q86UE3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 HCG4P8-203ENST00000443049 980 ntBASIC12.58□□□□□ -0.4
ZNF546Q86UE3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 MIR4751-201ENST00000578027 74 ntBASIC12.58□□□□□ -0.4
ZNF546Q86UE3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 AC024267.1-201ENST00000582320 895 ntBASIC12.58□□□□□ -0.4
ZNF546Q86UE3 AC097359.3-201ENST00000603982 1210 ntBASIC12.58□□□□□ -0.4
ZNF546Q86UE3 AC004790.2-201ENST00000623588 572 ntBASIC12.58□□□□□ -0.4
ZNF546Q86UE3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF546Q86UE3 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF546Q86UE3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF546Q86UE3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF546Q86UE3 TCAM1P-207ENST00000485295 1537 ntBASIC12.57□□□□□ -0.4
ZNF546Q86UE3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF546Q86UE3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF546Q86UE3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
ZNF546Q86UE3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF546Q86UE3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF546Q86UE3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF546Q86UE3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF546Q86UE3 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms