Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 PPY2P-201ENST00000582808 702 ntBASIC17.87■□□□□ 0.45
CTR9Q6PD62 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 AC138696.2-201ENST00000607376 223 ntBASIC17.87■□□□□ 0.45
CTR9Q6PD62 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 MIR6869-201ENST00000619434 62 ntBASIC17.87■□□□□ 0.45
CTR9Q6PD62 ZBED1P1-201ENST00000502364 1930 ntBASIC17.87■□□□□ 0.45
CTR9Q6PD62 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 AC144831.1-201ENST00000573312 2656 ntBASIC17.87■□□□□ 0.45
CTR9Q6PD62 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 KRT8P4-201ENST00000509735 1454 ntBASIC17.87■□□□□ 0.45
CTR9Q6PD62 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 AC020910.5-201ENST00000623668 1865 ntBASIC17.86■□□□□ 0.45
CTR9Q6PD62 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.86■□□□□ 0.45
CTR9Q6PD62 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CTR9Q6PD62 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.86■□□□□ 0.45
CTR9Q6PD62 RPSAP36-202ENST00000494591 1261 ntBASIC17.86■□□□□ 0.45
CTR9Q6PD62 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CTR9Q6PD62 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.86■□□□□ 0.45
CTR9Q6PD62 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.86■□□□□ 0.45
CTR9Q6PD62 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.86■□□□□ 0.45
CTR9Q6PD62 RN7SL219P-201ENST00000582872 296 ntBASIC17.86■□□□□ 0.45
CTR9Q6PD62 EEF1DP1-201ENST00000585891 896 ntBASIC17.86■□□□□ 0.45
CTR9Q6PD62 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.86■□□□□ 0.45
CTR9Q6PD62 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.86■□□□□ 0.45
CTR9Q6PD62 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CTR9Q6PD62 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.86■□□□□ 0.45
CTR9Q6PD62 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CTR9Q6PD62 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.86■□□□□ 0.45
CTR9Q6PD62 AC011840.2-201ENST00000563063 1520 ntBASIC17.86■□□□□ 0.45
CTR9Q6PD62 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 AC009093.2-202ENST00000620513 2079 ntBASIC17.86■□□□□ 0.45
CTR9Q6PD62 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTR9Q6PD62 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 AC004945.1-201ENST00000416738 983 ntBASIC17.85■□□□□ 0.45
CTR9Q6PD62 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 Z93015.1-201ENST00000451718 390 ntBASIC17.85■□□□□ 0.45
CTR9Q6PD62 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 MIR4683-201ENST00000579659 81 ntBASIC17.85■□□□□ 0.45
CTR9Q6PD62 AGAP7P-201ENST00000582299 2062 ntBASIC17.85■□□□□ 0.45
CTR9Q6PD62 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 AGAP14-201ENST00000624701 2060 ntBASIC17.85■□□□□ 0.45
CTR9Q6PD62 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.85■□□□□ 0.45
CTR9Q6PD62 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTR9Q6PD62 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms