Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 WASH4P-201ENST00000564273 1246 ntBASIC18.02■□□□□ 0.48
RNF20Q5VTR2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 CLUHP6-201ENST00000580789 941 ntBASIC18.02■□□□□ 0.48
RNF20Q5VTR2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 AL033527.5-201ENST00000641382 801 ntBASIC18.02■□□□□ 0.48
RNF20Q5VTR2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF20Q5VTR2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF20Q5VTR2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF20Q5VTR2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF20Q5VTR2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF20Q5VTR2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF20Q5VTR2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
RNF20Q5VTR2 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF20Q5VTR2 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF20Q5VTR2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RNF20Q5VTR2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RNF20Q5VTR2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RNF20Q5VTR2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RNF20Q5VTR2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF20Q5VTR2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF20Q5VTR2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18■□□□□ 0.47
RNF20Q5VTR2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18■□□□□ 0.47
RNF20Q5VTR2 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF20Q5VTR2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18■□□□□ 0.47
RNF20Q5VTR2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RNF20Q5VTR2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
RNF20Q5VTR2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF20Q5VTR2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF20Q5VTR2 AL365209.1-201ENST00000624418 6473 ntBASIC18■□□□□ 0.47
RNF20Q5VTR2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF20Q5VTR2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RNF20Q5VTR2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF20Q5VTR2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF20Q5VTR2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18■□□□□ 0.47
RNF20Q5VTR2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RNF20Q5VTR2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18■□□□□ 0.47
RNF20Q5VTR2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF20Q5VTR2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18■□□□□ 0.47
RNF20Q5VTR2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18■□□□□ 0.47
RNF20Q5VTR2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RNF20Q5VTR2 AC022137.2-201ENST00000503482 481 ntBASIC18■□□□□ 0.47
RNF20Q5VTR2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF20Q5VTR2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18■□□□□ 0.47
RNF20Q5VTR2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18■□□□□ 0.47
RNF20Q5VTR2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF20Q5VTR2 ABBA01031660.1-201ENST00000635219 756 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms