Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARS2Q5ST30 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VARS2Q5ST30 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 AL138725.1-201ENST00000407347 1314 ntBASIC15.94■□□□□ 0.14
VARS2Q5ST30 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 NKAIN1P1-201ENST00000435754 582 ntBASIC15.94■□□□□ 0.14
VARS2Q5ST30 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 HIST2H2BC-201ENST00000498492 580 ntBASIC15.94■□□□□ 0.14
VARS2Q5ST30 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.94■□□□□ 0.14
VARS2Q5ST30 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARS2Q5ST30 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 KRT8P29-201ENST00000420409 1371 ntBASIC15.93■□□□□ 0.14
VARS2Q5ST30 WASH3P-207ENST00000560956 1394 ntBASIC15.93■□□□□ 0.14
VARS2Q5ST30 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 AC021723.1-201ENST00000486306 515 ntBASIC15.93■□□□□ 0.14
VARS2Q5ST30 AC026616.1-201ENST00000523157 525 ntBASIC15.93■□□□□ 0.14
VARS2Q5ST30 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 AC025165.5-201ENST00000602802 578 ntBASIC15.93■□□□□ 0.14
VARS2Q5ST30 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms