Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 ARSEP1-201ENST00000420443 635 ntBASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 CROCCP4-201ENST00000457096 498 ntBASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 AL162274.1-201ENST00000617191 1098 ntBASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 INE2-201ENST00000630399 1874 ntBASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 FKBP4P6-201ENST00000457486 1332 ntBASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 AC011840.2-201ENST00000563063 1520 ntBASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 CD8B2-202ENST00000417670 633 ntBASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 U91328.1-201ENST00000437528 223 ntBASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 AL391280.1-201ENST00000506969 1062 ntBASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 AC078819.1-201ENST00000547454 765 ntBASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 AC012085.1-201ENST00000548270 765 ntBASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 AC106820.3-201ENST00000561653 397 ntBASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 AC006453.4-201ENST00000636949 1252 ntBASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 AC113367.3-201ENST00000508316 1912 ntBASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 FAM45BP-202ENST00000592932 1624 ntBASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRICKLE4Q2TBC4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms