Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.77□□□□□ -0.37
SSBP1Q04837 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.77□□□□□ -0.37
SSBP1Q04837 KRT8P35-201ENST00000483942 1338 ntBASIC12.77□□□□□ -0.37
SSBP1Q04837 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SSBP1Q04837 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.77□□□□□ -0.37
SSBP1Q04837 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.77□□□□□ -0.37
SSBP1Q04837 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.77□□□□□ -0.37
SSBP1Q04837 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SSBP1Q04837 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.77□□□□□ -0.37
SSBP1Q04837 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.77□□□□□ -0.37
SSBP1Q04837 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.77□□□□□ -0.37
SSBP1Q04837 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.77□□□□□ -0.37
SSBP1Q04837 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SSBP1Q04837 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.76□□□□□ -0.37
SSBP1Q04837 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 EMBP1-201ENST00000458200 901 ntBASIC12.76□□□□□ -0.37
SSBP1Q04837 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.76□□□□□ -0.37
SSBP1Q04837 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.76□□□□□ -0.37
SSBP1Q04837 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.76□□□□□ -0.37
SSBP1Q04837 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 AC026120.1-201ENST00000611536 926 ntBASIC12.76□□□□□ -0.37
SSBP1Q04837 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.76□□□□□ -0.37
SSBP1Q04837 MIR6069-201ENST00000620069 79 ntBASIC12.76□□□□□ -0.37
SSBP1Q04837 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.76□□□□□ -0.37
SSBP1Q04837 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.76□□□□□ -0.37
SSBP1Q04837 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 CLK3P2-201ENST00000427566 1453 ntBASIC12.76□□□□□ -0.37
SSBP1Q04837 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.76□□□□□ -0.37
SSBP1Q04837 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.76□□□□□ -0.37
SSBP1Q04837 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 AC215219.1-201ENST00000400706 1817 ntBASIC12.76□□□□□ -0.37
SSBP1Q04837 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
SSBP1Q04837 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 DMBT1P1-203ENST00000636837 4628 ntBASIC12.76□□□□□ -0.37
SSBP1Q04837 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP1Q04837 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SSBP1Q04837 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.75□□□□□ -0.37
SSBP1Q04837 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
SSBP1Q04837 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SSBP1Q04837 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.75□□□□□ -0.37
SSBP1Q04837 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP1Q04837 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.75□□□□□ -0.37
SSBP1Q04837 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms