Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL1Q00532 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKL1Q00532 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKL1Q00532 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL1Q00532 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL1Q00532 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL1Q00532 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKL1Q00532 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDKL1Q00532 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKL1Q00532 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKL1Q00532 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKL1Q00532 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDKL1Q00532 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CDKL1Q00532 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.87□□□□□ -0.03
CDKL1Q00532 TSPY16P-201ENST00000449843 468 ntBASIC14.87□□□□□ -0.03
CDKL1Q00532 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDKL1Q00532 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.87□□□□□ -0.03
CDKL1Q00532 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.87□□□□□ -0.03
CDKL1Q00532 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.87□□□□□ -0.03
CDKL1Q00532 AC092552.1-201ENST00000547243 906 ntBASIC14.87□□□□□ -0.03
CDKL1Q00532 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.87□□□□□ -0.03
CDKL1Q00532 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.87□□□□□ -0.03
CDKL1Q00532 TMEM261P1-201ENST00000604899 340 ntBASIC14.87□□□□□ -0.03
CDKL1Q00532 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.87□□□□□ -0.03
CDKL1Q00532 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CDKL1Q00532 BX539320.1-201ENST00000623759 877 ntBASIC14.87□□□□□ -0.03
CDKL1Q00532 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKL1Q00532 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDKL1Q00532 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKL1Q00532 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
CDKL1Q00532 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKL1Q00532 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDKL1Q00532 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDKL1Q00532 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKL1Q00532 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKL1Q00532 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKL1Q00532 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL1Q00532 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CDKL1Q00532 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
CDKL1Q00532 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL1Q00532 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL1Q00532 KRT8P22-201ENST00000562317 1415 ntBASIC14.86□□□□□ -0.03
CDKL1Q00532 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL1Q00532 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL1Q00532 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.86□□□□□ -0.03
CDKL1Q00532 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.86□□□□□ -0.03
CDKL1Q00532 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL1Q00532 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.86□□□□□ -0.03
CDKL1Q00532 AC124283.3-201ENST00000570869 594 ntBASIC14.86□□□□□ -0.03
CDKL1Q00532 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL1Q00532 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.86□□□□□ -0.03
CDKL1Q00532 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.86□□□□□ -0.03
CDKL1Q00532 AL096865.1-201ENST00000606796 927 ntBASIC14.86□□□□□ -0.03
CDKL1Q00532 MIR8072-201ENST00000614241 80 ntBASIC14.86□□□□□ -0.03
CDKL1Q00532 AC097359.2-201ENST00000604992 2389 ntBASIC14.86□□□□□ -0.03
CDKL1Q00532 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDKL1Q00532 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
CDKL1Q00532 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL1Q00532 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.86□□□□□ -0.03
CDKL1Q00532 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDKL1Q00532 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL1Q00532 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDKL1Q00532 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms