Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 KRT8P35-201ENST00000483942 1338 ntBASIC17.29■□□□□ 0.36
CHMP4BP1P59074 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 MIR1202-201ENST00000408529 83 ntBASIC17.29■□□□□ 0.36
CHMP4BP1P59074 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 AC025279.2-201ENST00000569730 653 ntBASIC17.29■□□□□ 0.36
CHMP4BP1P59074 MIR3615-201ENST00000581999 87 ntBASIC17.29■□□□□ 0.36
CHMP4BP1P59074 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 BX539320.1-201ENST00000623759 877 ntBASIC17.29■□□□□ 0.36
CHMP4BP1P59074 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP4BP1P59074 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 AP005019.2-201ENST00000615104 511 ntBASIC17.28■□□□□ 0.36
CHMP4BP1P59074 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 AC068587.10-201ENST00000641210 219 ntBASIC17.28■□□□□ 0.36
CHMP4BP1P59074 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP4BP1P59074 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms