Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.65■□□□□ 0.74
RIPK4P57078 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.65■□□□□ 0.74
RIPK4P57078 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RIPK4P57078 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RIPK4P57078 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIPK4P57078 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIPK4P57078 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RIPK4P57078 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIPK4P57078 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RIPK4P57078 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
RIPK4P57078 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
RIPK4P57078 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RIPK4P57078 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RIPK4P57078 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
RIPK4P57078 AC018529.2-202ENST00000611482 3087 ntBASIC19.64■□□□□ 0.73
RIPK4P57078 AC068587.6-202ENST00000641839 5619 ntBASIC19.64■□□□□ 0.73
RIPK4P57078 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RIPK4P57078 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RIPK4P57078 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.64■□□□□ 0.73
RIPK4P57078 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.64■□□□□ 0.73
RIPK4P57078 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.64■□□□□ 0.73
RIPK4P57078 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RIPK4P57078 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RIPK4P57078 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.64■□□□□ 0.73
RIPK4P57078 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.64■□□□□ 0.73
RIPK4P57078 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC19.64■□□□□ 0.73
RIPK4P57078 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RIPK4P57078 AC018442.1-201ENST00000421439 2061 ntBASIC19.64■□□□□ 0.73
RIPK4P57078 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RIPK4P57078 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RIPK4P57078 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC19.64■□□□□ 0.73
RIPK4P57078 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RIPK4P57078 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC19.63■□□□□ 0.73
RIPK4P57078 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RIPK4P57078 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.63■□□□□ 0.73
RIPK4P57078 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.63■□□□□ 0.73
RIPK4P57078 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 AL136309.1-201ENST00000403917 691 ntBASIC19.63■□□□□ 0.73
RIPK4P57078 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.63■□□□□ 0.73
RIPK4P57078 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 GOLGA2P4-201ENST00000441462 777 ntBASIC19.63■□□□□ 0.73
RIPK4P57078 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.63■□□□□ 0.73
RIPK4P57078 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.63■□□□□ 0.73
RIPK4P57078 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.63■□□□□ 0.73
RIPK4P57078 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.63■□□□□ 0.73
RIPK4P57078 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.63■□□□□ 0.73
RIPK4P57078 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RIPK4P57078 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC19.63■□□□□ 0.73
RIPK4P57078 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC19.63■□□□□ 0.73
RIPK4P57078 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RIPK4P57078 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC19.63■□□□□ 0.73
RIPK4P57078 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIPK4P57078 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC19.62■□□□□ 0.73
RIPK4P57078 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
RIPK4P57078 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC19.62■□□□□ 0.73
RIPK4P57078 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RIPK4P57078 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RIPK4P57078 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.62■□□□□ 0.73
RIPK4P57078 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.62■□□□□ 0.73
RIPK4P57078 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.62■□□□□ 0.73
RIPK4P57078 MIR326-201ENST00000362220 95 ntBASIC19.62■□□□□ 0.73
RIPK4P57078 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
RIPK4P57078 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.62■□□□□ 0.73
RIPK4P57078 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.62■□□□□ 0.73
RIPK4P57078 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 HIST2H2BB-201ENST00000449108 381 ntBASIC19.62■□□□□ 0.73
RIPK4P57078 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.62■□□□□ 0.73
RIPK4P57078 FAM86HP-204ENST00000513466 959 ntBASIC19.62■□□□□ 0.73
RIPK4P57078 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.62■□□□□ 0.73
RIPK4P57078 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.62■□□□□ 0.73
RIPK4P57078 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.62■□□□□ 0.73
RIPK4P57078 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RIPK4P57078 EEF1DP1-201ENST00000585891 896 ntBASIC19.62■□□□□ 0.73
RIPK4P57078 AL358472.3-201ENST00000608147 415 ntBASIC19.62■□□□□ 0.73
RIPK4P57078 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.62■□□□□ 0.73
RIPK4P57078 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC19.62■□□□□ 0.73
RIPK4P57078 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms