Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC090857.1-201ENST00000527400 390 ntBASIC14.43□□□□□ -0.1
CLDN6P56747 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.43□□□□□ -0.1
CLDN6P56747 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.43□□□□□ -0.1
CLDN6P56747 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.43□□□□□ -0.1
CLDN6P56747 AC135983.4-201ENST00000564116 1262 ntBASIC14.43□□□□□ -0.1
CLDN6P56747 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.43□□□□□ -0.1
CLDN6P56747 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 AC002472.3-201ENST00000640124 621 ntBASIC14.43□□□□□ -0.1
CLDN6P56747 HLA-C-210ENST00000640219 976 ntBASIC14.43□□□□□ -0.1
CLDN6P56747 AL805961.1-201ENST00000642026 753 ntBASIC14.43□□□□□ -0.1
CLDN6P56747 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.43□□□□□ -0.1
CLDN6P56747 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.43□□□□□ -0.1
CLDN6P56747 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 AL603832.2-201ENST00000566195 2125 ntBASIC14.42□□□□□ -0.1
CLDN6P56747 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CLDN6P56747 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CLDN6P56747 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN6P56747 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN6P56747 AC105917.1-201ENST00000506637 2539 ntBASIC14.42□□□□□ -0.1
CLDN6P56747 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN6P56747 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLDN6P56747 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLDN6P56747 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.42□□□□□ -0.1
CLDN6P56747 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN6P56747 RCC2P8-201ENST00000502779 1035 ntBASIC14.42□□□□□ -0.1
CLDN6P56747 AC019193.1-201ENST00000506678 823 ntBASIC14.42□□□□□ -0.1
CLDN6P56747 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.42□□□□□ -0.1
CLDN6P56747 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC14.42□□□□□ -0.1
CLDN6P56747 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.42□□□□□ -0.1
CLDN6P56747 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN6P56747 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.42□□□□□ -0.1
CLDN6P56747 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 AC005324.6-201ENST00000587972 613 ntBASIC14.42□□□□□ -0.1
CLDN6P56747 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.42□□□□□ -0.1
CLDN6P56747 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CLDN6P56747 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.42□□□□□ -0.1
CLDN6P56747 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.42□□□□□ -0.1
CLDN6P56747 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.42□□□□□ -0.1
CLDN6P56747 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CLDN6P56747 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN6P56747 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDN6P56747 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CLDN6P56747 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CLDN6P56747 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 AC068418.2-201ENST00000577309 3703 ntBASIC14.41□□□□□ -0.1
CLDN6P56747 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDN6P56747 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CLDN6P56747 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.41□□□□□ -0.1
CLDN6P56747 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLDN6P56747 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN6P56747 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms