Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH8P55286 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH8P55286 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH8P55286 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH8P55286 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.05■□□□□ 0.16
CDH8P55286 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH8P55286 OR10B1P-201ENST00000601666 907 ntBASIC16.05■□□□□ 0.16
CDH8P55286 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 AC018442.1-201ENST00000421439 2061 ntBASIC16.05■□□□□ 0.16
CDH8P55286 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH8P55286 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH8P55286 AC106881.1-201ENST00000605849 3329 ntBASIC16.05■□□□□ 0.16
CDH8P55286 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDH8P55286 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CDH8P55286 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH8P55286 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 AC011840.2-201ENST00000563063 1520 ntBASIC16.04■□□□□ 0.16
CDH8P55286 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
CDH8P55286 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CDH8P55286 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 AC103702.1-201ENST00000548801 2630 ntBASIC16.04■□□□□ 0.16
CDH8P55286 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH8P55286 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH8P55286 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH8P55286 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH8P55286 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH8P55286 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CDH8P55286 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 RN7SKP230-201ENST00000365642 335 ntBASIC16.04■□□□□ 0.16
CDH8P55286 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 CD8B2-202ENST00000417670 633 ntBASIC16.04■□□□□ 0.16
CDH8P55286 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH8P55286 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 FTLP10-202ENST00000505798 471 ntBASIC16.04■□□□□ 0.16
CDH8P55286 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH8P55286 AC106820.3-201ENST00000561653 397 ntBASIC16.04■□□□□ 0.16
CDH8P55286 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH8P55286 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.04■□□□□ 0.16
CDH8P55286 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH8P55286 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH8P55286 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 AC013726.1-201ENST00000563747 2285 ntBASIC16.04■□□□□ 0.16
CDH8P55286 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDH8P55286 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH8P55286 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CDH8P55286 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDH8P55286 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CDH8P55286 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 AC009093.2-202ENST00000620513 2079 ntBASIC16.04■□□□□ 0.16
CDH8P55286 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH8P55286 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH8P55286 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH8P55286 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CDH8P55286 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH8P55286 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH8P55286 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDH8P55286 AC003102.2-201ENST00000589195 1469 ntBASIC16.03■□□□□ 0.16
CDH8P55286 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDH8P55286 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH8P55286 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDH8P55286 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDH8P55286 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms