Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.29■□□□□ 0.52
NUP98P52948 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.28■□□□□ 0.52
NUP98P52948 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
NUP98P52948 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.28■□□□□ 0.52
NUP98P52948 AL512306.1-201ENST00000432698 848 ntBASIC18.28■□□□□ 0.52
NUP98P52948 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.28■□□□□ 0.52
NUP98P52948 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.28■□□□□ 0.52
NUP98P52948 KRT8P1-201ENST00000557533 1207 ntBASIC18.28■□□□□ 0.52
NUP98P52948 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
NUP98P52948 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.28■□□□□ 0.52
NUP98P52948 AC090386.2-201ENST00000623010 1039 ntBASIC18.28■□□□□ 0.52
NUP98P52948 AC018442.1-201ENST00000421439 2061 ntBASIC18.28■□□□□ 0.52
NUP98P52948 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.28■□□□□ 0.52
NUP98P52948 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.28■□□□□ 0.52
NUP98P52948 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
NUP98P52948 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.28■□□□□ 0.52
NUP98P52948 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NUP98P52948 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NUP98P52948 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.28■□□□□ 0.52
NUP98P52948 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.28■□□□□ 0.52
NUP98P52948 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.28■□□□□ 0.52
NUP98P52948 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.28■□□□□ 0.52
NUP98P52948 OR8T1P-201ENST00000421347 918 ntBASIC18.28■□□□□ 0.52
NUP98P52948 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.28■□□□□ 0.52
NUP98P52948 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 RN7SL665P-201ENST00000578793 300 ntBASIC18.28■□□□□ 0.52
NUP98P52948 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.28■□□□□ 0.52
NUP98P52948 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP98P52948 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
NUP98P52948 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NUP98P52948 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUP98P52948 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.27■□□□□ 0.52
NUP98P52948 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.27■□□□□ 0.52
NUP98P52948 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUP98P52948 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUP98P52948 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.27■□□□□ 0.52
NUP98P52948 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUP98P52948 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.27■□□□□ 0.52
NUP98P52948 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUP98P52948 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUP98P52948 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.27■□□□□ 0.52
NUP98P52948 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.27■□□□□ 0.52
NUP98P52948 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUP98P52948 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUP98P52948 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUP98P52948 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NUP98P52948 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUP98P52948 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC18.27■□□□□ 0.52
NUP98P52948 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.27■□□□□ 0.52
NUP98P52948 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.27■□□□□ 0.52
NUP98P52948 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.27■□□□□ 0.52
NUP98P52948 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.27■□□□□ 0.52
NUP98P52948 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.27■□□□□ 0.52
NUP98P52948 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUP98P52948 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUP98P52948 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUP98P52948 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.27■□□□□ 0.51
NUP98P52948 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.27■□□□□ 0.51
NUP98P52948 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUP98P52948 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.27■□□□□ 0.51
NUP98P52948 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NUP98P52948 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUP98P52948 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP98P52948 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.26■□□□□ 0.51
NUP98P52948 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NUP98P52948 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.26■□□□□ 0.51
NUP98P52948 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP98P52948 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.26■□□□□ 0.51
NUP98P52948 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
NUP98P52948 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP98P52948 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP98P52948 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.26■□□□□ 0.51
NUP98P52948 AL031713.1-201ENST00000564813 661 ntBASIC18.26■□□□□ 0.51
NUP98P52948 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP98P52948 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC18.26■□□□□ 0.51
NUP98P52948 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NUP98P52948 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP98P52948 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUP98P52948 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUP98P52948 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.26■□□□□ 0.51
NUP98P52948 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP98P52948 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NUP98P52948 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP98P52948 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms