Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EFNA3P52797 CHMP1AP1-201ENST00000445563 662 ntBASIC14.09□□□□□ -0.15
EFNA3P52797 HOMER2P2-201ENST00000451621 847 ntBASIC14.09□□□□□ -0.15
EFNA3P52797 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
EFNA3P52797 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNA3P52797 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.09□□□□□ -0.15
EFNA3P52797 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.09□□□□□ -0.15
EFNA3P52797 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.09□□□□□ -0.15
EFNA3P52797 PPY2P-201ENST00000582808 702 ntBASIC14.09□□□□□ -0.15
EFNA3P52797 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EFNA3P52797 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.09□□□□□ -0.15
EFNA3P52797 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.09□□□□□ -0.15
EFNA3P52797 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.09□□□□□ -0.15
EFNA3P52797 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.09□□□□□ -0.15
EFNA3P52797 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.09□□□□□ -0.15
EFNA3P52797 MIR6869-201ENST00000619434 62 ntBASIC14.09□□□□□ -0.15
EFNA3P52797 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
EFNA3P52797 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
EFNA3P52797 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.09□□□□□ -0.15
EFNA3P52797 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EFNA3P52797 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.09□□□□□ -0.15
EFNA3P52797 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNA3P52797 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EFNA3P52797 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EFNA3P52797 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
EFNA3P52797 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.09□□□□□ -0.15
EFNA3P52797 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
EFNA3P52797 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNA3P52797 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.09□□□□□ -0.15
EFNA3P52797 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EFNA3P52797 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNA3P52797 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.09□□□□□ -0.15
EFNA3P52797 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNA3P52797 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.09□□□□□ -0.15
EFNA3P52797 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.09□□□□□ -0.15
EFNA3P52797 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.09□□□□□ -0.15
EFNA3P52797 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.09□□□□□ -0.15
EFNA3P52797 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
EFNA3P52797 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
EFNA3P52797 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
EFNA3P52797 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
EFNA3P52797 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.08□□□□□ -0.15
EFNA3P52797 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
EFNA3P52797 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.08□□□□□ -0.15
EFNA3P52797 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
EFNA3P52797 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
EFNA3P52797 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
EFNA3P52797 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.08□□□□□ -0.15
EFNA3P52797 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
EFNA3P52797 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 AC104640.1-201ENST00000562617 2109 ntBASIC14.08□□□□□ -0.16
EFNA3P52797 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.08□□□□□ -0.16
EFNA3P52797 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.08□□□□□ -0.16
EFNA3P52797 KRT8P4-201ENST00000509735 1454 ntBASIC14.08□□□□□ -0.16
EFNA3P52797 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.08□□□□□ -0.16
EFNA3P52797 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
EFNA3P52797 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.08□□□□□ -0.16
EFNA3P52797 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 FTLP10-202ENST00000505798 471 ntBASIC14.08□□□□□ -0.16
EFNA3P52797 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.08□□□□□ -0.16
EFNA3P52797 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
EFNA3P52797 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.08□□□□□ -0.16
EFNA3P52797 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.08□□□□□ -0.16
EFNA3P52797 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.08□□□□□ -0.16
EFNA3P52797 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
EFNA3P52797 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.08□□□□□ -0.16
EFNA3P52797 AC138696.2-201ENST00000607376 223 ntBASIC14.08□□□□□ -0.16
EFNA3P52797 AC005695.3-201ENST00000614522 232 ntBASIC14.08□□□□□ -0.16
EFNA3P52797 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 AC018735.1-201ENST00000437208 1502 ntBASIC14.08□□□□□ -0.16
EFNA3P52797 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.08□□□□□ -0.16
EFNA3P52797 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.08□□□□□ -0.16
EFNA3P52797 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
EFNA3P52797 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
EFNA3P52797 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA3P52797 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
EFNA3P52797 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
EFNA3P52797 ZBED1P1-201ENST00000502364 1930 ntBASIC14.07□□□□□ -0.16
EFNA3P52797 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
EFNA3P52797 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms