Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TUBP50607 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TUBP50607 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.92■□□□□ 0.14
TUBP50607 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TUBP50607 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TUBP50607 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TUBP50607 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.91■□□□□ 0.14
TUBP50607 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TUBP50607 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.91■□□□□ 0.14
TUBP50607 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
TUBP50607 AC126365.1-201ENST00000578585 1514 ntBASIC15.91■□□□□ 0.14
TUBP50607 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
TUBP50607 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.91■□□□□ 0.14
TUBP50607 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.91■□□□□ 0.14
TUBP50607 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.91■□□□□ 0.14
TUBP50607 AC022616.1-201ENST00000518688 554 ntBASIC15.91■□□□□ 0.14
TUBP50607 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 AC078819.1-201ENST00000547454 765 ntBASIC15.91■□□□□ 0.14
TUBP50607 AC012085.1-201ENST00000548270 765 ntBASIC15.91■□□□□ 0.14
TUBP50607 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.91■□□□□ 0.14
TUBP50607 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.91■□□□□ 0.14
TUBP50607 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.91■□□□□ 0.14
TUBP50607 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.91■□□□□ 0.14
TUBP50607 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TUBP50607 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.91■□□□□ 0.14
TUBP50607 AC006453.4-201ENST00000636949 1252 ntBASIC15.91■□□□□ 0.14
TUBP50607 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
TUBP50607 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
TUBP50607 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.91■□□□□ 0.14
TUBP50607 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TUBP50607 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBP50607 LINC00528-201ENST00000600723 2160 ntBASIC15.9■□□□□ 0.14
TUBP50607 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TUBP50607 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TUBP50607 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.9■□□□□ 0.14
TUBP50607 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.9■□□□□ 0.14
TUBP50607 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 AC023024.2-201ENST00000623561 1993 ntBASIC15.9■□□□□ 0.14
TUBP50607 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.9■□□□□ 0.14
TUBP50607 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.9■□□□□ 0.14
TUBP50607 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.9■□□□□ 0.14
TUBP50607 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.9■□□□□ 0.14
TUBP50607 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.9■□□□□ 0.14
TUBP50607 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.9■□□□□ 0.14
TUBP50607 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.9■□□□□ 0.14
TUBP50607 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
TUBP50607 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.9■□□□□ 0.14
TUBP50607 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.9■□□□□ 0.14
TUBP50607 AL109954.1-202ENST00000564051 2148 ntBASIC15.9■□□□□ 0.14
TUBP50607 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.9■□□□□ 0.14
TUBP50607 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.9■□□□□ 0.14
TUBP50607 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.9■□□□□ 0.14
TUBP50607 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TUBP50607 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TUBP50607 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TUBP50607 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.9■□□□□ 0.14
TUBP50607 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.9■□□□□ 0.14
TUBP50607 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TUBP50607 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TUBP50607 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBP50607 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBP50607 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBP50607 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TUBP50607 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBP50607 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms