Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VEGFBP49765 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.8■□□□□ 0.28
VEGFBP49765 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VEGFBP49765 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.8■□□□□ 0.28
VEGFBP49765 AC138932.1-201ENST00000534164 6830 ntBASIC16.8■□□□□ 0.28
VEGFBP49765 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VEGFBP49765 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.8■□□□□ 0.28
VEGFBP49765 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VEGFBP49765 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.8■□□□□ 0.28
VEGFBP49765 AL137244.1-201ENST00000422931 865 ntBASIC16.8■□□□□ 0.28
VEGFBP49765 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.8■□□□□ 0.28
VEGFBP49765 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 ANKRD26P1-203ENST00000569528 966 ntBASIC16.8■□□□□ 0.28
VEGFBP49765 EEF1DP7-201ENST00000580496 513 ntBASIC16.8■□□□□ 0.28
VEGFBP49765 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.8■□□□□ 0.28
VEGFBP49765 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.8■□□□□ 0.28
VEGFBP49765 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.8■□□□□ 0.28
VEGFBP49765 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.8■□□□□ 0.28
VEGFBP49765 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.8■□□□□ 0.28
VEGFBP49765 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VEGFBP49765 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VEGFBP49765 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.8■□□□□ 0.28
VEGFBP49765 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.8■□□□□ 0.28
VEGFBP49765 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VEGFBP49765 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.8■□□□□ 0.28
VEGFBP49765 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VEGFBP49765 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VEGFBP49765 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.79■□□□□ 0.28
VEGFBP49765 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VEGFBP49765 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
VEGFBP49765 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 OR6D1P-202ENST00000641007 5290 ntBASIC16.79■□□□□ 0.28
VEGFBP49765 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
VEGFBP49765 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.79■□□□□ 0.28
VEGFBP49765 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
VEGFBP49765 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC16.79■□□□□ 0.28
VEGFBP49765 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
VEGFBP49765 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 OR7E115P-201ENST00000382617 1024 ntBASIC16.79■□□□□ 0.28
VEGFBP49765 ALG1L15P-201ENST00000482834 794 ntBASIC16.79■□□□□ 0.28
VEGFBP49765 AC011431.1-201ENST00000512971 230 ntBASIC16.79■□□□□ 0.28
VEGFBP49765 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC16.79■□□□□ 0.28
VEGFBP49765 ACTBP9-201ENST00000587663 1099 ntBASIC16.79■□□□□ 0.28
VEGFBP49765 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.79■□□□□ 0.28
VEGFBP49765 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 CICP11-201ENST00000434745 2827 ntBASIC16.79■□□□□ 0.28
VEGFBP49765 AL591122.2-201ENST00000624125 1853 ntBASIC16.79■□□□□ 0.28
VEGFBP49765 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VEGFBP49765 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.79■□□□□ 0.28
VEGFBP49765 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VEGFBP49765 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VEGFBP49765 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VEGFBP49765 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.78■□□□□ 0.28
VEGFBP49765 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VEGFBP49765 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VEGFBP49765 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VEGFBP49765 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.78■□□□□ 0.28
VEGFBP49765 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VEGFBP49765 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VEGFBP49765 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.78■□□□□ 0.28
VEGFBP49765 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC16.78■□□□□ 0.28
VEGFBP49765 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VEGFBP49765 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VEGFBP49765 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC16.78■□□□□ 0.28
VEGFBP49765 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.78■□□□□ 0.28
VEGFBP49765 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.78■□□□□ 0.28
VEGFBP49765 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC16.78■□□□□ 0.28
VEGFBP49765 PSAT1P2-201ENST00000426107 972 ntBASIC16.78■□□□□ 0.28
VEGFBP49765 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.78■□□□□ 0.28
VEGFBP49765 RN7SL128P-201ENST00000467883 305 ntBASIC16.78■□□□□ 0.28
VEGFBP49765 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC16.78■□□□□ 0.28
VEGFBP49765 LY6E-215ENST00000523847 427 ntTSL 3 BASIC16.78■□□□□ 0.28
VEGFBP49765 ACY3-202ENST00000529256 933 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms