Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 KLF2P3-201ENST00000451977 1087 ntBASIC13.79□□□□□ -0.2
CENPAP49450 HLA-V-204ENST00000476601 1289 ntBASIC13.79□□□□□ -0.2
CENPAP49450 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.79□□□□□ -0.2
CENPAP49450 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.79□□□□□ -0.2
CENPAP49450 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.79□□□□□ -0.2
CENPAP49450 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.79□□□□□ -0.2
CENPAP49450 AC051619.7-201ENST00000568314 623 ntBASIC13.79□□□□□ -0.2
CENPAP49450 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.79□□□□□ -0.2
CENPAP49450 TEX28P1-201ENST00000613479 1221 ntBASIC13.79□□□□□ -0.2
CENPAP49450 TEX28P2-201ENST00000617764 1221 ntBASIC13.79□□□□□ -0.2
CENPAP49450 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
CENPAP49450 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.79□□□□□ -0.2
CENPAP49450 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.79□□□□□ -0.2
CENPAP49450 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CENPAP49450 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CENPAP49450 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CENPAP49450 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.79□□□□□ -0.2
CENPAP49450 AL731571.1-201ENST00000617058 5428 ntBASIC13.79□□□□□ -0.2
CENPAP49450 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CENPAP49450 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CENPAP49450 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.79□□□□□ -0.2
CENPAP49450 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.79□□□□□ -0.2
CENPAP49450 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.79□□□□□ -0.2
CENPAP49450 AC145098.2-201ENST00000623593 3026 ntBASIC13.79□□□□□ -0.2
CENPAP49450 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.79□□□□□ -0.2
CENPAP49450 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CENPAP49450 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CENPAP49450 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CENPAP49450 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CENPAP49450 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.78□□□□□ -0.2
CENPAP49450 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.78□□□□□ -0.2
CENPAP49450 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.78□□□□□ -0.2
CENPAP49450 REXO1L2P-201ENST00000425429 2069 ntBASIC13.78□□□□□ -0.2
CENPAP49450 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CENPAP49450 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CENPAP49450 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 AL139385.1-201ENST00000611744 3272 ntBASIC13.78□□□□□ -0.2
CENPAP49450 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.78□□□□□ -0.2
CENPAP49450 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.78□□□□□ -0.2
CENPAP49450 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 AL139400.1-201ENST00000366220 510 ntBASIC13.78□□□□□ -0.2
CENPAP49450 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CENPAP49450 AC104457.1-201ENST00000401024 814 ntBASIC13.78□□□□□ -0.2
CENPAP49450 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.78□□□□□ -0.2
CENPAP49450 TOMM22P5-201ENST00000416399 439 ntBASIC13.78□□□□□ -0.2
CENPAP49450 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.78□□□□□ -0.2
CENPAP49450 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.78□□□□□ -0.2
CENPAP49450 AC107890.1-201ENST00000422478 521 ntBASIC13.78□□□□□ -0.2
CENPAP49450 FAM86GP-201ENST00000448322 971 ntBASIC13.78□□□□□ -0.2
CENPAP49450 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.78□□□□□ -0.2
CENPAP49450 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.78□□□□□ -0.2
CENPAP49450 KRT18P43-201ENST00000469825 1281 ntBASIC13.78□□□□□ -0.2
CENPAP49450 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.78□□□□□ -0.2
CENPAP49450 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.78□□□□□ -0.2
CENPAP49450 AL512361.1-201ENST00000554200 418 ntBASIC13.78□□□□□ -0.2
CENPAP49450 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.78□□□□□ -0.2
CENPAP49450 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.78□□□□□ -0.2
CENPAP49450 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.78□□□□□ -0.2
CENPAP49450 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CENPAP49450 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.78□□□□□ -0.2
CENPAP49450 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CENPAP49450 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.78□□□□□ -0.2
CENPAP49450 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.78□□□□□ -0.2
CENPAP49450 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.78□□□□□ -0.2
CENPAP49450 AC139749.1-202ENST00000617529 3139 ntBASIC13.78□□□□□ -0.2
CENPAP49450 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CENPAP49450 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.78□□□□□ -0.2
CENPAP49450 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CENPAP49450 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CENPAP49450 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CENPAP49450 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms