Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.22□□□□□ -0.13
GABRA4P48169 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GABRA4P48169 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
GABRA4P48169 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
GABRA4P48169 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.21□□□□□ -0.13
GABRA4P48169 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GABRA4P48169 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.21□□□□□ -0.13
GABRA4P48169 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.21□□□□□ -0.13
GABRA4P48169 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
GABRA4P48169 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
GABRA4P48169 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GABRA4P48169 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.21□□□□□ -0.13
GABRA4P48169 GPAA1P2-201ENST00000417923 928 ntBASIC14.21□□□□□ -0.13
GABRA4P48169 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.21□□□□□ -0.13
GABRA4P48169 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.21□□□□□ -0.13
GABRA4P48169 GCOM2-201ENST00000509133 1104 ntBASIC14.21□□□□□ -0.13
GABRA4P48169 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.21□□□□□ -0.13
GABRA4P48169 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.21□□□□□ -0.13
GABRA4P48169 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.21□□□□□ -0.13
GABRA4P48169 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.21□□□□□ -0.13
GABRA4P48169 AC009955.4-201ENST00000597192 544 ntBASIC14.21□□□□□ -0.13
GABRA4P48169 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.21□□□□□ -0.13
GABRA4P48169 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.21□□□□□ -0.13
GABRA4P48169 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
GABRA4P48169 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
GABRA4P48169 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GABRA4P48169 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
GABRA4P48169 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GABRA4P48169 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.21□□□□□ -0.14
GABRA4P48169 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GABRA4P48169 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.21□□□□□ -0.14
GABRA4P48169 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
GABRA4P48169 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.21□□□□□ -0.14
GABRA4P48169 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
GABRA4P48169 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GABRA4P48169 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GABRA4P48169 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GABRA4P48169 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.2□□□□□ -0.14
GABRA4P48169 AC004898.1-201ENST00000451057 766 ntBASIC14.2□□□□□ -0.14
GABRA4P48169 AC099548.2-209ENST00000480264 625 ntBASIC14.2□□□□□ -0.14
GABRA4P48169 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.2□□□□□ -0.14
GABRA4P48169 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.2□□□□□ -0.14
GABRA4P48169 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.2□□□□□ -0.14
GABRA4P48169 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.2□□□□□ -0.14
GABRA4P48169 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.2□□□□□ -0.14
GABRA4P48169 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 AC243960.2-201ENST00000600996 747 ntBASIC14.2□□□□□ -0.14
GABRA4P48169 AL022328.3-201ENST00000607943 679 ntBASIC14.2□□□□□ -0.14
GABRA4P48169 AC244093.1-201ENST00000610837 814 ntBASIC14.2□□□□□ -0.14
GABRA4P48169 AL136301.1-201ENST00000615830 422 ntBASIC14.2□□□□□ -0.14
GABRA4P48169 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.2□□□□□ -0.14
GABRA4P48169 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.2□□□□□ -0.14
GABRA4P48169 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GABRA4P48169 SHC1P1-201ENST00000425230 1745 ntBASIC14.2□□□□□ -0.14
GABRA4P48169 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
GABRA4P48169 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.2□□□□□ -0.14
GABRA4P48169 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 AC126755.1-201ENST00000525846 6405 ntBASIC14.2□□□□□ -0.14
GABRA4P48169 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA4P48169 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
GABRA4P48169 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GABRA4P48169 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.19□□□□□ -0.14
GABRA4P48169 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms