Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
SLC1A3P43003 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SLC1A3P43003 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC1A3P43003 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC1A3P43003 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SLC1A3P43003 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SLC1A3P43003 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC1A3P43003 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
SLC1A3P43003 MTHFR-210ENST00000641407 2387 ntBASIC13.91□□□□□ -0.18
SLC1A3P43003 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A3P43003 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC1A3P43003 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC1A3P43003 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A3P43003 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SLC1A3P43003 AL158070.2-201ENST00000623713 1621 ntBASIC13.91□□□□□ -0.18
SLC1A3P43003 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
SLC1A3P43003 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SLC1A3P43003 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC1A3P43003 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC1A3P43003 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.91□□□□□ -0.18
SLC1A3P43003 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SLC1A3P43003 AC092552.1-201ENST00000547243 906 ntBASIC13.91□□□□□ -0.18
SLC1A3P43003 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A3P43003 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.91□□□□□ -0.18
SLC1A3P43003 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.91□□□□□ -0.18
SLC1A3P43003 TMEM261P1-201ENST00000604899 340 ntBASIC13.91□□□□□ -0.18
SLC1A3P43003 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC1A3P43003 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
SLC1A3P43003 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
SLC1A3P43003 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
SLC1A3P43003 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SLC1A3P43003 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SLC1A3P43003 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A3P43003 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SLC1A3P43003 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC1A3P43003 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A3P43003 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A3P43003 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SLC1A3P43003 AC027601.5-201ENST00000624065 2482 ntBASIC13.9□□□□□ -0.18
SLC1A3P43003 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A3P43003 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A3P43003 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.9□□□□□ -0.18
SLC1A3P43003 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
SLC1A3P43003 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A3P43003 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A3P43003 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A3P43003 C1QBPP1-201ENST00000400117 770 ntBASIC13.9□□□□□ -0.18
SLC1A3P43003 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC1A3P43003 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC1A3P43003 AC002472.2-201ENST00000442739 958 ntBASIC13.9□□□□□ -0.18
SLC1A3P43003 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC1A3P43003 AC007431.3-201ENST00000623221 587 ntBASIC13.9□□□□□ -0.18
SLC1A3P43003 BX539320.1-201ENST00000623759 877 ntBASIC13.9□□□□□ -0.18
SLC1A3P43003 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.9□□□□□ -0.18
SLC1A3P43003 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 LILRP1-201ENST00000444199 1370 ntBASIC13.9□□□□□ -0.18
SLC1A3P43003 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A3P43003 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A3P43003 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SLC1A3P43003 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms