Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.85□□□□□ -0.19
RFC3P40938 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
RFC3P40938 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
RFC3P40938 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RFC3P40938 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 FAM86HP-204ENST00000513466 959 ntBASIC13.85□□□□□ -0.19
RFC3P40938 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.85□□□□□ -0.19
RFC3P40938 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.85□□□□□ -0.19
RFC3P40938 AP006547.1-201ENST00000563435 692 ntBASIC13.85□□□□□ -0.19
RFC3P40938 DUX4L45-201ENST00000566406 1057 ntBASIC13.85□□□□□ -0.19
RFC3P40938 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.85□□□□□ -0.19
RFC3P40938 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.85□□□□□ -0.19
RFC3P40938 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.85□□□□□ -0.19
RFC3P40938 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.85□□□□□ -0.19
RFC3P40938 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 ENPP7P14-201ENST00000621765 1040 ntBASIC13.85□□□□□ -0.19
RFC3P40938 AC006453.4-201ENST00000636949 1252 ntBASIC13.85□□□□□ -0.19
RFC3P40938 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RFC3P40938 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RFC3P40938 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.85□□□□□ -0.19
RFC3P40938 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
RFC3P40938 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.85□□□□□ -0.19
RFC3P40938 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RFC3P40938 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.85□□□□□ -0.19
RFC3P40938 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFC3P40938 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.84□□□□□ -0.19
RFC3P40938 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.84□□□□□ -0.19
RFC3P40938 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.84□□□□□ -0.19
RFC3P40938 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RFC3P40938 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.84□□□□□ -0.19
RFC3P40938 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 AC055811.4-201ENST00000624039 1754 ntBASIC13.84□□□□□ -0.19
RFC3P40938 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.84□□□□□ -0.19
RFC3P40938 AC136621.1-201ENST00000624017 2304 ntBASIC13.84□□□□□ -0.19
RFC3P40938 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 AC026748.1-201ENST00000624349 3251 ntBASIC13.84□□□□□ -0.19
RFC3P40938 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
RFC3P40938 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.84□□□□□ -0.19
RFC3P40938 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.84□□□□□ -0.19
RFC3P40938 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RFC3P40938 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RFC3P40938 PFN1P12-201ENST00000455938 534 ntBASIC13.84□□□□□ -0.19
RFC3P40938 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
RFC3P40938 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.84□□□□□ -0.19
RFC3P40938 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.84□□□□□ -0.19
RFC3P40938 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.84□□□□□ -0.19
RFC3P40938 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.84□□□□□ -0.19
RFC3P40938 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.84□□□□□ -0.19
RFC3P40938 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RFC3P40938 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.84□□□□□ -0.19
RFC3P40938 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.84□□□□□ -0.19
RFC3P40938 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 AC087481.3-201ENST00000602886 1894 ntBASIC13.84□□□□□ -0.19
RFC3P40938 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFC3P40938 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
RFC3P40938 KRT8P44-201ENST00000441609 1350 ntBASIC13.83□□□□□ -0.19
RFC3P40938 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RFC3P40938 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RFC3P40938 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
RFC3P40938 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
RFC3P40938 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RFC3P40938 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
RFC3P40938 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RFC3P40938 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
RFC3P40938 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RFC3P40938 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RFC3P40938 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.83□□□□□ -0.2
RFC3P40938 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFC3P40938 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RFC3P40938 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms