Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.33■□□□□ 0.53
PDE6BP35913 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.33■□□□□ 0.53
PDE6BP35913 KRT8P31-201ENST00000504812 1408 ntBASIC18.33■□□□□ 0.53
PDE6BP35913 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6BP35913 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6BP35913 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6BP35913 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PDE6BP35913 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.33■□□□□ 0.53
PDE6BP35913 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6BP35913 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6BP35913 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.33■□□□□ 0.53
PDE6BP35913 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6BP35913 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6BP35913 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6BP35913 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6BP35913 AC018629.1-201ENST00000623381 1736 ntBASIC18.33■□□□□ 0.52
PDE6BP35913 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6BP35913 MIR1227-201ENST00000408484 88 ntBASIC18.33■□□□□ 0.52
PDE6BP35913 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.33■□□□□ 0.52
PDE6BP35913 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.33■□□□□ 0.52
PDE6BP35913 RN7SL81P-201ENST00000493781 261 ntBASIC18.33■□□□□ 0.52
PDE6BP35913 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC18.33■□□□□ 0.52
PDE6BP35913 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6BP35913 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC18.33■□□□□ 0.52
PDE6BP35913 AC131206.1-201ENST00000538078 1211 ntBASIC18.33■□□□□ 0.52
PDE6BP35913 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.33■□□□□ 0.52
PDE6BP35913 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PDE6BP35913 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.33■□□□□ 0.52
PDE6BP35913 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6BP35913 AC127024.7-201ENST00000625101 200 ntBASIC18.33■□□□□ 0.52
PDE6BP35913 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.33■□□□□ 0.52
PDE6BP35913 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6BP35913 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6BP35913 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PDE6BP35913 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6BP35913 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.33■□□□□ 0.52
PDE6BP35913 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6BP35913 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.33■□□□□ 0.52
PDE6BP35913 CYP2T1P-202ENST00000641596 2535 ntBASIC18.32■□□□□ 0.52
PDE6BP35913 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDE6BP35913 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.32■□□□□ 0.52
PDE6BP35913 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PDE6BP35913 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.32■□□□□ 0.52
PDE6BP35913 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 AC114947.1-202ENST00000514136 344 ntBASIC18.32■□□□□ 0.52
PDE6BP35913 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.32■□□□□ 0.52
PDE6BP35913 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.32■□□□□ 0.52
PDE6BP35913 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
PDE6BP35913 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDE6BP35913 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.32■□□□□ 0.52
PDE6BP35913 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDE6BP35913 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.32■□□□□ 0.52
PDE6BP35913 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PDE6BP35913 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6BP35913 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.32■□□□□ 0.52
PDE6BP35913 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6BP35913 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.31■□□□□ 0.52
PDE6BP35913 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6BP35913 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6BP35913 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PDE6BP35913 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.31■□□□□ 0.52
PDE6BP35913 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6BP35913 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6BP35913 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6BP35913 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC18.31■□□□□ 0.52
PDE6BP35913 LYPLA2P1-203ENST00000447689 696 ntBASIC18.31■□□□□ 0.52
PDE6BP35913 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.31■□□□□ 0.52
PDE6BP35913 FTH1P22-201ENST00000456305 520 ntBASIC18.31■□□□□ 0.52
PDE6BP35913 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC18.31■□□□□ 0.52
PDE6BP35913 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.31■□□□□ 0.52
PDE6BP35913 AC141586.1-203ENST00000567242 366 ntBASIC18.31■□□□□ 0.52
PDE6BP35913 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.31■□□□□ 0.52
PDE6BP35913 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC18.31■□□□□ 0.52
PDE6BP35913 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PDE6BP35913 AC025262.2-201ENST00000623975 1056 ntBASIC18.31■□□□□ 0.52
PDE6BP35913 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6BP35913 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6BP35913 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6BP35913 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6BP35913 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6BP35913 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC18.31■□□□□ 0.52
PDE6BP35913 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6BP35913 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.3■□□□□ 0.52
PDE6BP35913 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms