Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.13■□□□□ 0.17
SYN1P17600 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SYN1P17600 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.13■□□□□ 0.17
SYN1P17600 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
SYN1P17600 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.13■□□□□ 0.17
SYN1P17600 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.13■□□□□ 0.17
SYN1P17600 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
SYN1P17600 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
SYN1P17600 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
SYN1P17600 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.13■□□□□ 0.17
SYN1P17600 AC069224.1-201ENST00000566372 1715 ntBASIC16.13■□□□□ 0.17
SYN1P17600 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.13■□□□□ 0.17
SYN1P17600 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.13■□□□□ 0.17
SYN1P17600 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYN1P17600 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.12■□□□□ 0.17
SYN1P17600 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SYN1P17600 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.12■□□□□ 0.17
SYN1P17600 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.12■□□□□ 0.17
SYN1P17600 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
SYN1P17600 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SYN1P17600 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SYN1P17600 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SYN1P17600 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.12■□□□□ 0.17
SYN1P17600 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.12■□□□□ 0.17
SYN1P17600 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.12■□□□□ 0.17
SYN1P17600 AC007952.4-201ENST00000573866 637 ntBASIC16.12■□□□□ 0.17
SYN1P17600 AC010632.2-201ENST00000588369 1224 ntBASIC16.12■□□□□ 0.17
SYN1P17600 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.12■□□□□ 0.17
SYN1P17600 AC002044.2-201ENST00000624910 970 ntBASIC16.12■□□□□ 0.17
SYN1P17600 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SYN1P17600 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 AL596087.1-201ENST00000400979 1969 ntBASIC16.12■□□□□ 0.17
SYN1P17600 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.12■□□□□ 0.17
SYN1P17600 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 AL139384.1-201ENST00000612143 3047 ntBASIC16.12■□□□□ 0.17
SYN1P17600 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.12■□□□□ 0.17
SYN1P17600 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.12■□□□□ 0.17
SYN1P17600 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.12■□□□□ 0.17
SYN1P17600 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYN1P17600 AC092127.1-201ENST00000567093 3455 ntBASIC16.11■□□□□ 0.17
SYN1P17600 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYN1P17600 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SYN1P17600 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SYN1P17600 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYN1P17600 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SYN1P17600 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SYN1P17600 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.11■□□□□ 0.17
SYN1P17600 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYN1P17600 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SYN1P17600 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.11■□□□□ 0.17
SYN1P17600 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.11■□□□□ 0.17
SYN1P17600 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.11■□□□□ 0.17
SYN1P17600 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.11■□□□□ 0.17
SYN1P17600 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.11■□□□□ 0.17
SYN1P17600 TREHP1-201ENST00000531328 465 ntBASIC16.11■□□□□ 0.17
SYN1P17600 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.11■□□□□ 0.17
SYN1P17600 RN7SL357P-201ENST00000581065 298 ntBASIC16.11■□□□□ 0.17
SYN1P17600 AP005264.6-204ENST00000588436 719 ntBASIC16.11■□□□□ 0.17
SYN1P17600 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
SYN1P17600 AC021016.3-201ENST00000608367 477 ntBASIC16.11■□□□□ 0.17
SYN1P17600 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SYN1P17600 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYN1P17600 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYN1P17600 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SYN1P17600 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.11■□□□□ 0.17
SYN1P17600 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.11■□□□□ 0.17
SYN1P17600 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYN1P17600 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.11■□□□□ 0.17
SYN1P17600 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYN1P17600 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SYN1P17600 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SYN1P17600 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms