Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC11.81□□□□□ -0.52
CD28P10747 POM121L9P-203ENST00000441984 1285 ntBASIC11.81□□□□□ -0.52
CD28P10747 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC11.81□□□□□ -0.52
CD28P10747 AL391280.1-201ENST00000506969 1062 ntBASIC11.81□□□□□ -0.52
CD28P10747 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC11.81□□□□□ -0.52
CD28P10747 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC11.81□□□□□ -0.52
CD28P10747 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC11.81□□□□□ -0.52
CD28P10747 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC11.81□□□□□ -0.52
CD28P10747 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 AL645728.2-202ENST00000641679 227 ntBASIC11.81□□□□□ -0.52
CD28P10747 REXO1L5P-201ENST00000622260 2098 ntBASIC11.81□□□□□ -0.52
CD28P10747 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 DBET-201ENST00000630918 3363 ntBASIC11.81□□□□□ -0.52
CD28P10747 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.81□□□□□ -0.52
CD28P10747 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.81□□□□□ -0.52
CD28P10747 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.81□□□□□ -0.52
CD28P10747 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.81□□□□□ -0.52
CD28P10747 KRT8P4-201ENST00000509735 1454 ntBASIC11.81□□□□□ -0.52
CD28P10747 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CD28P10747 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CD28P10747 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.8□□□□□ -0.52
CD28P10747 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.8□□□□□ -0.52
CD28P10747 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
CD28P10747 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
CD28P10747 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.8□□□□□ -0.52
CD28P10747 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CD28P10747 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC11.8□□□□□ -0.52
CD28P10747 AP002414.2-201ENST00000591780 3365 ntBASIC11.8□□□□□ -0.52
CD28P10747 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
CD28P10747 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CD28P10747 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.8□□□□□ -0.52
CD28P10747 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC11.8□□□□□ -0.52
CD28P10747 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 HNRNPA1P32-201ENST00000396326 963 ntBASIC11.8□□□□□ -0.52
CD28P10747 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.8□□□□□ -0.52
CD28P10747 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 AC079178.1-201ENST00000420915 656 ntBASIC11.8□□□□□ -0.52
CD28P10747 FNTAP2-201ENST00000430308 634 ntBASIC11.8□□□□□ -0.52
CD28P10747 CALR4P-201ENST00000431943 946 ntBASIC11.8□□□□□ -0.52
CD28P10747 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.8□□□□□ -0.52
CD28P10747 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC11.8□□□□□ -0.52
CD28P10747 AC004898.1-201ENST00000451057 766 ntBASIC11.8□□□□□ -0.52
CD28P10747 RNF41-210ENST00000552244 716 ntTSL 3 BASIC11.8□□□□□ -0.52
CD28P10747 RN7SL713P-201ENST00000582127 302 ntBASIC11.8□□□□□ -0.52
CD28P10747 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC11.8□□□□□ -0.52
CD28P10747 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC11.8□□□□□ -0.52
CD28P10747 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.8□□□□□ -0.52
CD28P10747 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.8□□□□□ -0.52
CD28P10747 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
CD28P10747 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CD28P10747 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.8□□□□□ -0.52
CD28P10747 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.8□□□□□ -0.52
CD28P10747 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CD28P10747 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD28P10747 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms